Is there a "canonical" way of doing that? I've been using head -n | tail -1 which does the trick, but I've been wondering if there's a Bash tool that specifically extracts a line (or a range of lines) from a file.
By "canonical" I mean a program whose main function is doing that.
head and pipe with tail will be slow for a huge file. I would suggest sed like this:
sed 'NUMq;d' file
Where NUM is the number of the line you want to print; so, for example, sed '10q;d' file to print the 10th line of file.
Explanation:
NUMq will quit immediately when the line number is NUM.
d will delete the line instead of printing it; this is inhibited on the last line because the q causes the rest of the script to be skipped when quitting.
If you have NUM in a variable, you will want to use double quotes instead of single:
sed "${NUM}q;d" file
sed -n '2p' < file.txt
will print 2nd line
sed -n '2011p' < file.txt
2011th line
sed -n '10,33p' < file.txt
line 10 up to line 33
sed -n '1p;3p' < file.txt
1st and 3th line
and so on...
For adding lines with sed, you can check this:
I have a unique situation where I can benchmark the solutions proposed on this page, and so I'm writing this answer as a consolidation of the proposed solutions with included run times for each.
Set Up
I have a 3.261 gigabyte ASCII text data file with one key-value pair per row. The file contains 3,339,550,320 rows in total and defies opening in any editor I have tried, including my go-to Vim. I need to subset this file in order to investigate some of the values that I've discovered only start around row ~500,000,000.
Because the file has so many rows:
My best-case-scenario is a solution that extracts only a single line from the file without reading any of the other rows in the file, but I can't think of how I would accomplish this in Bash.
For the purposes of my sanity I'm not going to be trying to read the full 500,000,000 lines I'd need for my own problem. Instead I'll be trying to extract row 50,000,000 out of 3,339,550,320 (which means reading the full file will take 60x longer than necessary).
I will be using the time built-in to benchmark each command.
Baseline
First let's see how the head tail solution:
$ time head -50000000 myfile.ascii | tail -1
pgm_icnt = 0
real 1m15.321s
The baseline for row 50 million is 00:01:15.321, if I'd gone straight for row 500 million it'd probably be ~12.5 minutes.
cut
I'm dubious of this one, but it's worth a shot:
$ time cut -f50000000 -d$'\n' myfile.ascii
pgm_icnt = 0
real 5m12.156s
This one took 00:05:12.156 to run, which is much slower than the baseline! I'm not sure whether it read through the entire file or just up to line 50 million before stopping, but regardless this doesn't seem like a viable solution to the problem.
AWK
I only ran the solution with the exit because I wasn't going to wait for the full file to run:
$ time awk 'NR == 50000000 {print; exit}' myfile.ascii
pgm_icnt = 0
real 1m16.583s
This code ran in 00:01:16.583, which is only ~1 second slower, but still not an improvement on the baseline. At this rate if the exit command had been excluded it would have probably taken around ~76 minutes to read the entire file!
Perl
I ran the existing Perl solution as well:
$ time perl -wnl -e '$.== 50000000 && print && exit;' myfile.ascii
pgm_icnt = 0
real 1m13.146s
This code ran in 00:01:13.146, which is ~2 seconds faster than the baseline. If I'd run it on the full 500,000,000 it would probably take ~12 minutes.
sed
The top answer on the board, here's my result:
$ time sed "50000000q;d" myfile.ascii
pgm_icnt = 0
real 1m12.705s
This code ran in 00:01:12.705, which is 3 seconds faster than the baseline, and ~0.4 seconds faster than Perl. If I'd run it on the full 500,000,000 rows it would have probably taken ~12 minutes.
mapfile
I have bash 3.1 and therefore cannot test the mapfile solution.
Conclusion
It looks like, for the most part, it's difficult to improve upon the head tail solution. At best the sed solution provides a ~3% increase in efficiency.
(percentages calculated with the formula % = (runtime/baseline - 1) * 100)
Row 50,000,000
sedperlhead|tailawkcutRow 500,000,000
sedperlhead|tailawkcutRow 3,338,559,320
sedperlhead|tailawkcut
With awk it is pretty fast:
awk 'NR == num_line' file
When this is true, the default behaviour of awk is performed: {print $0}.
If your file happens to be huge, you'd better exit after reading the required line. This way you save CPU time See time comparison at the end of the answer.
awk 'NR == num_line {print; exit}' file
If you want to give the line number from a bash variable you can use:
awk 'NR == n' n=$num file
awk -v n=$num 'NR == n' file # equivalent
See how much time is saved by using exit, specially if the line happens to be in the first part of the file:
# Let's create a 10M lines file
for ((i=0; i<100000; i++)); do echo "bla bla"; done > 100Klines
for ((i=0; i<100; i++)); do cat 100Klines; done > 10Mlines
$ time awk 'NR == 1234567 {print}' 10Mlines
bla bla
real 0m1.303s
user 0m1.246s
sys 0m0.042s
$ time awk 'NR == 1234567 {print; exit}' 10Mlines
bla bla
real 0m0.198s
user 0m0.178s
sys 0m0.013s
So the difference is 0.198s vs 1.303s, around 6x times faster.
According to my tests, in terms of performance and readability my recommendation is:
tail -n+N | head -1
N is the line number that you want. For example, tail -n+7 input.txt | head -1 will print the 7th line of the file.
tail -n+N will print everything starting from line N, and head -1 will make it stop after one line.
The alternative head -N | tail -1 is perhaps slightly more readable. For example, this will print the 7th line:
head -7 input.txt | tail -1
When it comes to performance, there is not much difference for smaller sizes, but it will be outperformed by the tail | head (from above) when the files become huge.
The top-voted sed 'NUMq;d' is interesting to know, but I would argue that it will be understood by fewer people out of the box than the head/tail solution and it is also slower than tail/head.
In my tests, both tails/heads versions outperformed sed 'NUMq;d' consistently. That is in line with the other benchmarks that were posted. It is hard to find a case where tails/heads was really bad. It is also not surprising, as these are operations that you would expect to be heavily optimized in a modern Unix system.
To get an idea about the performance differences, these are the number that I get for a huge file (9.3G):
tail -n+N | head -1: 3.7 sechead -N | tail -1: 4.6 secsed Nq;d: 18.8 secResults may differ, but the performance head | tail and tail | head is, in general, comparable for smaller inputs, and sed is always slower by a significant factor (around 5x or so).
To reproduce my benchmark, you can try the following, but be warned that it will create a 9.3G file in the current working directory:
#!/bin/bash
readonly file=tmp-input.txt
readonly size=1000000000
readonly pos=500000000
readonly retries=3
seq 1 $size > $file
echo "*** head -N | tail -1 ***"
for i in $(seq 1 $retries) ; do
time head "-$pos" $file | tail -1
done
echo "-------------------------"
echo
echo "*** tail -n+N | head -1 ***"
echo
seq 1 $size > $file
ls -alhg $file
for i in $(seq 1 $retries) ; do
time tail -n+$pos $file | head -1
done
echo "-------------------------"
echo
echo "*** sed Nq;d ***"
echo
seq 1 $size > $file
ls -alhg $file
for i in $(seq 1 $retries) ; do
time sed $pos'q;d' $file
done
/bin/rm $file
Here is the output of a run on my machine (ThinkPad X1 Carbon with an SSD and 16G of memory). I assume in the final run everything will come from the cache, not from disk:
*** head -N | tail -1 ***
500000000
real 0m9,800s
user 0m7,328s
sys 0m4,081s
500000000
real 0m4,231s
user 0m5,415s
sys 0m2,789s
500000000
real 0m4,636s
user 0m5,935s
sys 0m2,684s
-------------------------
*** tail -n+N | head -1 ***
-rw-r--r-- 1 phil 9,3G Jan 19 19:49 tmp-input.txt
500000000
real 0m6,452s
user 0m3,367s
sys 0m1,498s
500000000
real 0m3,890s
user 0m2,921s
sys 0m0,952s
500000000
real 0m3,763s
user 0m3,004s
sys 0m0,760s
-------------------------
*** sed Nq;d ***
-rw-r--r-- 1 phil 9,3G Jan 19 19:50 tmp-input.txt
500000000
real 0m23,675s
user 0m21,557s
sys 0m1,523s
500000000
real 0m20,328s
user 0m18,971s
sys 0m1,308s
500000000
real 0m19,835s
user 0m18,830s
sys 0m1,004s
Save two keystrokes, print Nth line without using bracket:
sed -n Np <fileName>
^ ^
\ \___ 'p' for printing
\______ '-n' for not printing by default
For example, to print 100th line:
sed -n 100p foo.txt
Wow, all the possibilities!
Try this:
sed -n "${lineNum}p" $file
or one of these depending upon your version of Awk:
awk -vlineNum=$lineNum 'NR == lineNum {print $0}' $file
awk -v lineNum=4 '{if (NR == lineNum) {print $0}}' $file
awk '{if (NR == lineNum) {print $0}}' lineNum=$lineNum $file
(You may have to try the nawk or gawk command).
Is there a tool that only does the print that particular line? Not one of the standard tools. However, sed is probably the closest and simplest to use.
This question being tagged Bash, here's the Bash (≥4) way of doing: use mapfile with the -s (skip) and -n (count) option.
If you need to get the 42nd line of a file file:
mapfile -s 41 -n 1 ary < file
At this point, you'll have an array ary the fields of which containing the lines of file (including the trailing newline), where we have skipped the first 41 lines (-s 41), and stopped after reading one line (-n 1). So that's really the 42nd line. To print it out:
printf '%s' "${ary[0]}"
If you need a range of lines, say the range 42–666 (inclusive), and say you don't want to do the math yourself, and print them on stdout:
mapfile -s $((42-1)) -n $((666-42+1)) ary < file
printf '%s' "${ary[@]}"
If you need to process these lines too, it's not really convenient to store the trailing newline. In this case use the -t option (trim):
mapfile -t -s $((42-1)) -n $((666-42+1)) ary < file
# do stuff
printf '%s\n' "${ary[@]}"
You can have a function do that for you:
print_file_range() {
# $1-$2 is the range of file $3 to be printed to stdout
local ary
mapfile -s $(($1-1)) -n $(($2-$1+1)) ary < "$3"
printf '%s' "${ary[@]}"
}
No external commands, only Bash builtins!
You may also used sed print and quit:
sed -n '10{p;q;}' file # print line 10
You can also use Perl for this:
perl -wnl -e '$.== NUM && print && exit;' some.file
As a followup to CaffeineConnoisseur's very helpful benchmarking answer... I was curious as to how fast the 'mapfile' method was compared to others (as that wasn't tested), so I tried a quick-and-dirty speed comparison myself as I do have bash 4 handy. Threw in a test of the "tail | head" method (rather than head | tail) mentioned in one of the comments on the top answer while I was at it, as folks are singing its praises. I don't have anything nearly the size of the testfile used; the best I could find on short notice was a 14M pedigree file (long lines that are whitespace-separated, just under 12000 lines).
Short version: mapfile appears faster than the cut method, but slower than everything else, so I'd call it a dud. tail | head, OTOH, looks like it could be the fastest, although with a file this size the difference is not all that substantial compared to sed.
$ time head -11000 [filename] | tail -1
[output redacted]
real 0m0.117s
$ time cut -f11000 -d$'\n' [filename]
[output redacted]
real 0m1.081s
$ time awk 'NR == 11000 {print; exit}' [filename]
[output redacted]
real 0m0.058s
$ time perl -wnl -e '$.== 11000 && print && exit;' [filename]
[output redacted]
real 0m0.085s
$ time sed "11000q;d" [filename]
[output redacted]
real 0m0.031s
$ time (mapfile -s 11000 -n 1 ary < [filename]; echo ${ary[0]})
[output redacted]
real 0m0.309s
$ time tail -n+11000 [filename] | head -n1
[output redacted]
real 0m0.028s
Hope this helps!
The fastest solution for big files is always tail|head, provided that the two distances:
SEare known. Then, we could use this:
mycount="$E"; (( E > S )) && mycount="+$S"
howmany="$(( endline - startline + 1 ))"
tail -n "$mycount"| head -n "$howmany"
howmany is just the count of lines required.
Some more detail in https://unix.stackexchange.com/a/216614/79743
All the above answers directly answer the question. But here's a less direct solution but a potentially more important idea, to provoke thought.
Since line lengths are arbitrary, all the bytes of the file before the nth line need to be read. If you have a huge file or need to repeat this task many times, and this process is time-consuming, then you should seriously think about whether you should be storing your data in a different way in the first place.
The real solution is to have an index, e.g. at the start of the file, indicating the positions where the lines begin. You could use a database format, or just add a table at the start of the file. Alternatively create a separate index file to accompany your large text file.
e.g. you might create a list of character positions for newlines:
awk 'BEGIN{c=0;print(c)}{c+=length()+1;print(c+1)}' file.txt > file.idx
then read with tail, which actually seeks directly to the appropriate point in the file!
e.g. to get line 1000:
tail -c +$(awk 'NR=1000' file.idx) file.txt | head -1
If you got multiple lines by delimited by \n (normally new line). You can use 'cut' as well:
echo "$data" | cut -f2 -d$'\n'
You will get the 2nd line from the file. -f3 gives you the 3rd line.
Using what others mentioned, I wanted this to be a quick & dandy function in my bash shell.
Create a file: ~/.functions
Add to it the contents:
getline() {
line=$1
sed $line'q;d' $2
}
Then add this to your ~/.bash_profile:
source ~/.functions
Now when you open a new bash window, you can just call the function as so:
getline 441 myfile.txt
Lots of good answers already. I personally go with awk. For convenience, if you use bash, just add the below to your ~/.bash_profile. And, the next time you log in (or if you source your .bash_profile after this update), you will have a new nifty "nth" function available to pipe your files through.
Execute this or put it in your ~/.bash_profile (if using bash) and reopen bash (or execute source ~/.bach_profile)
# print just the nth piped in line
nth () { awk -vlnum=${1} 'NR==lnum {print; exit}'; }
Then, to use it, simply pipe through it. E.g.,:
$ yes line | cat -n | nth 5
5 line
To print nth line using sed with a variable as line number:
a=4
sed -e $a'q:d' file
Here the '-e' flag is for adding script to command to be executed.
After taking a look at the top answer and the benchmark, I've implemented a tiny helper function:
function nth {
if (( ${#} < 1 || ${#} > 2 )); then
echo -e "usage: $0 \e[4mline\e[0m [\e[4mfile\e[0m]"
return 1
fi
if (( ${#} > 1 )); then
sed "$1q;d" $2
else
sed "$1q;d"
fi
}
Basically you can use it in two fashions:
nth 42 myfile.txt
do_stuff | nth 42
This is not a bash solution, but I found out that top choices didn't satisfy my needs, eg,
sed 'NUMq;d' file
was fast enough, but was hanging for hours and did not tell about any progress. I suggest compiling this cpp program and using it to find the row you want. You can compile it with g++ main.cpp, where main.cpp is the file with the content below. I got a.out and executed it with ./a.out
#include <iostream>
#include <string>
#include <fstream>
using namespace std;
int main() {
string filename;
cout << "Enter filename ";
cin >> filename;
int needed_row_number;
cout << "Enter row number ";
cin >> needed_row_number;
int progress_line_count;
cout << "Enter at which every number of rows to monitor progress ";
cin >> progress_line_count;
char ch;
int row_counter = 1;
fstream fin(filename, fstream::in);
while (fin >> noskipws >> ch) {
int ch_int = (int) ch;
if (row_counter == needed_row_number) {
cout << ch;
}
if (ch_int == 10) {
if (row_counter == needed_row_number) {
return 0;
}
row_counter++;
if (row_counter % progress_line_count == 0) {
cout << "Progress: line " << row_counter << endl;
}
}
}
return 0;
}
I've put some of the above answers into a short bash script that you can put into a file called get.sh and link to /usr/local/bin/get (or whatever other name you prefer).
#!/bin/bash
if [ "${1}" == "" ]; then
echo "error: blank line number";
exit 1
fi
re='^[0-9]+$'
if ! [[ $1 =~ $re ]] ; then
echo "error: line number arg not a number";
exit 1
fi
if [ "${2}" == "" ]; then
echo "error: blank file name";
exit 1
fi
sed "${1}q;d" $2;
exit 0
Ensure it's executable with
$ chmod +x get
Link it to make it available on the PATH with
$ ln -s get.sh /usr/local/bin/get
UPDATE 1 : found much faster method in awk
133.6 mn :rownum='133668997'; ( time ( pvE0 < ~/master_primelist_18a.txt | LC_ALL=C mawk2 -F'^$' -v \_="${rownum}" -- '!_{exit}!--_' ) )
in0: 5.45GiB 0:00:05 [1.02GiB/s] [1.02GiB/s] [======> ] 71%
( pvE 0.1 in0 < ~/master_primelist_18a.txt |
LC_ALL=C mawk2 -F'^$' -v -- ; ) 5.01s user
1.21s system 116% cpu 5.353 total
77.37219=195591955519519519559551=0x296B0FA7D668C4A64F7F=
===============================================
I'd like to contest the notion that perl is faster than awk :
so while my test file isn't nearly quite as many rows, it's also twice the size, at 7.58 GB -
I even gave perl some built-in advantageous - like hard-coding in the row number, and also going second, thus gaining any potential speedups from OS caching mechanism, if any
f="$( grealpath -ePq ~/master_primelist_18a.txt )"
rownum='133668997'
fg;fg; pv < "${f}" | gwc -lcm
echo; sleep 2;
echo;
( time ( pv -i 0.1 -cN in0 < "${f}" |
LC_ALL=C mawk2 '_{exit}_=NR==+__' FS='^$' __="${rownum}"
) ) | mawk 'BEGIN { print } END { print _ } NR'
sleep 2
( time ( pv -i 0.1 -cN in0 < "${f}" |
LC_ALL=C perl -wnl -e '$.== 133668997 && print && exit;'
) ) | mawk 'BEGIN { print } END { print _ } NR' ;
fg: no current job
fg: no current job
7.58GiB 0:00:28 [ 275MiB/s] [============>] 100%
148,110,134 8,134,435,629 8,134,435,629 <<<< rows, chars, and bytes
count as reported by gnu-wc
in0: 5.45GiB 0:00:07 [ 701MiB/s] [=> ] 71%
( pv -i 0.1 -cN in0 < "${f}" | LC_ALL=C mawk2 '_{exit}_=NR==+__' FS='^$' ; )
6.22s user 2.56s system 110% cpu 7.966 total
77.37219=195591955519519519559551=0x296B0FA7D668C4A64F7F=
in0: 5.45GiB 0:00:17 [ 328MiB/s] [=> ] 71%
( pv -i 0.1 -cN in0 < "${f}" | LC_ALL=C perl -wnl -e ; )
14.22s user 3.31s system 103% cpu 17.014 total
77.37219=195591955519519519559551=0x296B0FA7D668C4A64F7F=
I can re-run the test with perl 5.36 or even perl-6 if u think it's gonna make a difference (haven't installed either), but a gap of
7.966 secs (mawk2) vs. 17.014 secs (perl 5.34)
between the two, with the latter more than double the prior, it seems clear which one is indeed meaningfully faster to fetch a single row way deep in ASCII files.
This is perl 5, version 34, subversion 0 (v5.34.0) built for darwin-thread-multi-2level
Copyright 1987-2021, Larry Wall
mawk 1.9.9.6, 21 Aug 2016, Copyright Michael D. Brennan
If you want something that you can later customize without having to deal with bash you can compile this c program and drop the binary in your custom binaries directory. This assumes that you know how to edit the .bashrc file accordingly (only if you want to edit your path variable), If you don't know, this is a helpful link.
To run this code use (assuming you named the binary "line").
line [target line] [target file]
example
line 2 somefile.txt
The code:
#include <stdio.h>
#include <string.h>
#include <stdlib.h>
int main(int argc, char* argv[]){
if(argc != 3){
fprintf(stderr, "line needs a line number and a file name");
exit(0);
}
int lineNumber = atoi(argv[1]);
int counter = 0;
char *fileName = argv[2];
FILE *fileReader = fopen(fileName, "r");
if(fileReader == NULL){
fprintf(stderr, "Failed to open file");
exit(0);
}
size_t lineSize = 0;
char* line = NULL;
while(counter < lineNumber){
getline(&line, &linesize, fileReader);
counter++
}
getline(&line, &lineSize, fileReader);
printf("%s\n", line);
fclose(fileReader);
return 0;
}
EDIT: removed the fseek and replaced it with a while loop
sed '123q; d' is REALLY slow next to awk, for either BSD-sed or GNU-sed :
in0: 7.17GiB 0:00:15 [ 471MiB/s] [ 471MiB/s] [=====> ] 94%
( pvE 0.1 in0 < ~/ABC.txt | bsd-sed '147654389q;d' ; )
15.18s user 1.84s system 109% cpu 15.586 total
1 900.07259=
8888888888888888888888888888888888888888888888888888888888
8888888888888888888888888888888888888888888888888888888886
6666666666666666666666666666666666666666666666666666666666
6666666666666666666666666666666666666666666666666888888888
888888888888888888888888888888888888881
=
0x10D35C8F2B57FA0034318EC78AB989C94B63BDAAB1803BE1881D435E
604C5477626F1C07D9FDF39432A808C3C1E46D10CDC6FEB3D3B0C853
83F2A19D1F3F2BB2E998DC1F4598A49AC74AEE73ACA279F90F52090F
E35F2972CEFAA597F1B19774ABCA47E86893357CB4552AE38E38E38E31
=
in0: 7.17GiB 0:00:11 [ 661MiB/s] [ 661MiB/s] [=====> ] 94%
( pvE 0.1 in0 < ~/ABC.txt |
gnu-sed '147654389q;d'; )
10.92s user 1.74s system 113% cpu 11.122 total
1 900.07259=88888……
in0: 7.17GiB 0:00:08 [ 858MiB/s] [ 858MiB/s] [=====> ] 94%
( pvE 0.1 in0 < "$___" |
mawk -v __=$__ 'BEGIN{__=+__}__<NR{exit}__==NR'; )
7.72s user 2.21s system 115% cpu 8.575 total
1 900.07259=88888……
in0: 7.17GiB 0:00:05 [1.22GiB/s] [1.22GiB/s] [=====> ] 94%
( pvE 0.1 in0 < "$___" |
mawk2 -v __=$__ 'BEGIN{__=+__}__<NR{exit}__==NR'; )
5.18s user 1.78s system 118% cpu 5.885 total
1 900.07259=88888……