The steps for building hello-jni are:
Download Android NDK and unpack it in some directory (/opt for me):
Next, "cd /opt//samples/hello-jni" to the sample directory, and enter "/opt//ndk-build" to build the files and my output are as follows:
/opt/android-ndk/samples/hello-jni>/opt/android-ndk/ndk-build
[arm64-v8a] Gdbserver : [aarch64-linux-android-4.9] libs/arm64-v8a/gdbserver
[arm64-v8a] Gdbsetup : libs/arm64-v8a/gdb.setup
[x86_64] Gdbserver : [x86_64-4.9] libs/x86_64/gdbserver
[x86_64] Gdbsetup : libs/x86_64/gdb.setup
[mips64] Gdbserver : [mips64el-linux-android-4.9] libs/mips64/gdbserver
[mips64] Gdbsetup : libs/mips64/gdb.setup
[armeabi-v7a] Gdbserver : [arm-linux-androideabi-4.8] libs/armeabi-v7a/gdbserver
[armeabi-v7a] Gdbsetup : libs/armeabi-v7a/gdb.setup
[armeabi] Gdbserver : [arm-linux-androideabi-4.8] libs/armeabi/gdbserver
[armeabi] Gdbsetup : libs/armeabi/gdb.setup
[x86] Gdbserver : [x86-4.8] libs/x86/gdbserver
[x86] Gdbsetup : libs/x86/gdb.setup
[mips] Gdbserver : [mipsel-linux-android-4.8] libs/mips/gdbserver
[mips] Gdbsetup : libs/mips/gdb.setup
[arm64-v8a] Compile : hello-jni <= hello-jni.c
[arm64-v8a] SharedLibrary : libhello-jni.so
[arm64-v8a] Install : libhello-jni.so => libs/arm64-v8a/libhello-jni.so
[x86_64] Compile : hello-jni <= hello-jni.c
[x86_64] SharedLibrary : libhello-jni.so
[x86_64] Install : libhello-jni.so => libs/x86_64/libhello-jni.so
[mips64] Compile : hello-jni <= hello-jni.c
[mips64] SharedLibrary : libhello-jni.so
[mips64] Install : libhello-jni.so => libs/mips64/libhello-jni.so
[armeabi-v7a] Compile thumb : hello-jni <= hello-jni.c
[armeabi-v7a] SharedLibrary : libhello-jni.so
[armeabi-v7a] Install : libhello-jni.so => libs/armeabi-v7a/libhello-jni.so
[armeabi] Compile thumb : hello-jni <= hello-jni.c
[armeabi] SharedLibrary : libhello-jni.so
[armeabi] Install : libhello-jni.so => libs/armeabi/libhello-jni.so
[x86] Compile : hello-jni <= hello-jni.c
[x86] SharedLibrary : libhello-jni.so
[x86] Install : libhello-jni.so => libs/x86/libhello-jni.so
[mips] Compile : hello-jni <= hello-jni.c
[mips] SharedLibrary : libhello-jni.so
[mips] Install : libhello-jni.so => libs/mips/libhello-jni.so
Done. To build the output into apk files you will need to use Android SDK, see for eg:
Android NDK build with ANT script