You have to configure logback to log to stderr. Eclipse will display those lines in red.
But I strongly recommend you use the Grep Console Plugin:
Grep Console allows you to define a series of regular expressions which will be tested against the console output. Each expression matching a line will affect the style of either the entire line or parts of it. For example, error messages could be set to show up with a red background, or integer values showing the state of a certain variable could be rendered in bold font.
The advantage of this plugin is that you can highlight different log levels in different colors. I also highlight lines in stacktraces which belong to my classes. This makes finding the relevant lines in stacktraces much easier.
