In your original question you said that you're using css3D. I suggest that you do the following:
Set up an orthographic camera with fov = 1..179 degrees, where left = screenWidth / 2, right = screenWidth / - 2, top = screenHeight / 2, bottom = screenHeight / - 2. Near and far planes do not affect CSS3D rendering as far as I can tell from experience.
camera = new THREE.OrthographicCamera(left, right, top, bottom, near, far);
camera.fov = 75;
now you need to calculate the distance between the camera and object in such way that when the object is projected using the camera with settings above, the object has 1:1 coordinate correspondence on screen. This can be done in following way:
var camscale = Math.tan(( camera.fov / 2 ) / 180 * Math.PI);
var camfix = screenHeight / 2 / camscale;
- place your div to position: x, y, z
- set the camera's position to 0, 0, z + camfix
This should give you 1:1 coordinate correspondence with rendered result and your pixel values in css / div styles. Remember that the origin is in center and the object's position is the center of the object so you need to do adjustments in order to achieve coordinate specs from top-left corner for example
object.x = ( screenWidth - objectWidth ) / 2 + positionLeft
object.y = ( screenHeight - objectHeight ) / 2 + positionTop
object.z = 0
I hope this helps, I was struggling with same thing (exact control of the css3d scene) but managed to figure out that the Orthographic camera + viewport size adjusted distance from object did the trick. Don't alter the camera rotation or its x and y coordinates, just fiddle with the z and you're safe.