Now that IntelliJ 12.1 is out, I was hoping to be able to attach the debugger to a 'gradle run' app and have it stop at breakpoints. I've tried both right-clicking run and choosing to debug it, and setting GRADLE_OPTS environment variables as suggested in this answer:
Debug Gradle plugins with IntelliJ
and attaching the debugger remotely, which works fine, but neither one breaks on the breakpoints. I must be missing something.