Our build server was recently updated to use Xcode 5's xcodebuild. We've installed the iphoneos6.1 so that we can still use iPhone SDK 6.1 for some legacy projects that do not yet support iOS7. However, when we use xcodebuild to build these projects using -sdk iphoneos6.1, we still see problems with UIViewController's contents being laid out underneath navigation bars and tab bars.
Is there some way to build these projects that were developed with Xcode 4.6.3/base sdk iOS 6.1 using Xcode 5's xcodebuild, but preserving the views as they were laid out in the storyboard developed using Xcode 4.6.3? I took a look at the man page for ibtool, but I'm not seeing any option related to choosing a target SDK, or anything else that seems relevant to the "extends edges" problem I noted above.
Note that we haven't updated the storyboard using Xcode 5 - the project is continuing to be developed in Xcode 4.6.3, and only touches the Xcode 5 toolchain when our build server clones the project's git repo and builds using xcodebuild.