In my case on ios 9.1 this is tripped by thread 2
which seems to be some worker for the GLES driver
cause searching through the project sources I don't see
any references to GPUTools.
Thread 2 name: gputools.smt_poll.0x145722df0
Thread 2 Attributed:
0 libsystem_kernel.dylib 0x000000019a8b7440 __semwait_signal + 8
1 libsystem_c.dylib 0x000000019a7c9e2c nanosleep + 212
2 libsystem_c.dylib 0x000000019a7c9d4c 0x19a7bc000 + 56652
3 GPUToolsCore 0x0000000100ba0ae0 0x100b98000 + 35552
4 libsystem_pthread.dylib 0x000000019a97fb28 _pthread_body + 156
5 libsystem_pthread.dylib 0x000000019a97fa8c _pthread_body + 0
6 libsystem_pthread.dylib 0x000000019a97d028 thread_start + 4
See this:
iOS 7 and OpenGL issues/crashes
I've filed bug 23389472 with apple,
cause in my case this ain't a thread I or some 3rd party code has created,
and, thusly, this is very likely ain't my bug.
Bottom line is: if the offending thread is yours (that includes 3rd party software obviously) then Ryan's answer applies. Otherwise you either have
to contact Apple and/or, in the meantime, look for a workaround.