My task is to take one GeoTIFF, make some image segmentation on in, and save it to new GeoTIFF(with existing coordinates). If I understand correctly, the coordinates are preserved in GeoTIFF metadata. So I grab metadata from the original file:
File file = new File(inputFilePath);
ImageInputStream iis = ImageIO.createImageInputStream(file);
Iterator<ImageReader> readers = ImageIO.getImageReaders(iis);
IIOMetadata metadata=null;
ImageReader reader=null;
if (readers.hasNext()) {
// pick the first available ImageReader
reader = readers.next();
// attach source to the reader
reader.setInput(iis, true);
// read metadata of first image
metadata = reader.getImageMetadata(0);
}
And when I do
System.out.println("Metadata: "+metadata);, I see the correct XML tree of metatags.
So I'm do some magic with image
System.out.println("Starting segmentation");
BufferedImage image = UtilImageIO.loadImage(inputImage);
// Select input image type. Some algorithms behave different depending on image type
ImageType<MultiSpectral<ImageFloat32>> imageType = ImageType.ms(3, ImageFloat32.class);
ImageSuperpixels alg = FactoryImageSegmentation.fh04(new ConfigFh04(500, 30), imageType);
// Convert image into BoofCV format
ImageBase color = imageType.createImage(image.getWidth(), image.getHeight());
ConvertBufferedImage.convertFrom(image, color, true);
// Segment and display results
performSegmentation(alg, color);
System.out.println("Segmentation finished");
In result I obtain a BufferedImage(resultBufferedImage) with successfully image segmentation. And here starts my problems, I'm trying to save this BufferedImage with old metadata:
BufferedOutputStream out;
ImageWriter writer = ImageIO.getImageWriter(reader);
ImageOutputStream imgout = null;
FileOutputStream fos =null;
fos = new FileOutputStream(outputImage);
out = new BufferedOutputStream(fos);
imgout = ImageIO.createImageOutputStream(out);
writer.setOutput(imgout);
ImageWriteParam param = writer.getDefaultWriteParam();
IIOImage destIIOImage = new IIOImage(resultBufferedImage, null, metadata);
System.out.println("Before write");
writer.write(null, destIIOImage, null);
System.out.println("After write");
I get printed "After write". But program is still running, I tried to wait, but no results. So when I kill process the file is created successfully, even with geodata. How can I determine the finish of writing and stop program?
p.s. Image in default Ubuntu viewer seems to be nice, but when I opened it in QGIS I have transparent fields, and how can I make gray background transparent?
