Problem The problem I'm having was caused by the following action: When I had BBB connected to my PC (using USB cable), I accidentally formatted the ~92 MB partion that contained the getting started files.
Because of this, each time I apply power to BBB, the USB LEDs do not light up. It only works when I have the Angstrom image on an external microSD card.
What I've tried I thought that this was caused because the eMMC is corrupt and for some reason is not bootable. So, I tried to boot from the external microSD card (that has the newest image running) and to use dd command where if was equal to the current microSD card and of to the target microSD card (built in on the board).
When I restarted the BBB, I looks like dd was successful (when I executed it, it told me that everything was successful). Now, there is one partition with the GettingStarted files and another with the Linux kernel.
Question Despite this, it's not possible to boot from the internal microSD card. Does anyone know how this can be solved? Is there something to do with the boot order?