Python 3.5 on Windows 7
Modules installed: Numpy (1.11.1), Pandas (0.18.1), Matplotlib (1.5.1)
Pip version: 8.1.2
I'm installing many of the standard packages, and was able to install the 3 packages above without problems. Scipy's installation is not working however. After some searching on the issue through the 2 links below, I upgraded pip to the newest version. This hasn't fixed the issue, and I'm a bit lost.
From what I can gather, I'm missing lapack and numpy distutils files. I'm not familiar with lapack, and I installed the latest numpy just today. Perhaps I need to reset some paths and directories?
2 links I used for trouble shooting:
Python pip install fails: invalid command egg_info
Can't install Scipy through pip
Apologies for posting such a huge block of code, but I thought it would be best to include everything the error gives me.
Collecting scipy
Using cached scipy-0.17.1.tar.gz
Installing collected packages: scipy
Running setup.py install for scipy ... error
Complete output from command c:\users\jon\appdata\local\programs\python\pyth
on35-32\python.exe -u -c "import setuptools, tokenize;__file__='C:\\Users\\Jon\\
AppData\\Local\\Temp\\pip-build-ugbb8uwx\\scipy\\setup.py';exec(compile(getattr(
tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'
))" install --record C:\Users\Jon\AppData\Local\Temp\pip-uh3v7wvi-record\install
-record.txt --single-version-externally-managed --compile:
lapack_opt_info:
openblas_lapack_info:
libraries openblas not found in ['c:\\users\\jon\\appdata\\local\\programs
\\python\\python35-32\\lib', 'C:\\', 'c:\\users\\jon\\appdata\\local\\programs\\
python\\python35-32\\libs']
NOT AVAILABLE
lapack_mkl_info:
mkl_info:
libraries mkl,vml,guide not found in ['c:\\users\\jon\\appdata\\local\\pro
grams\\python\\python35-32\\lib', 'C:\\', 'c:\\users\\jon\\appdata\\local\\progr
ams\\python\\python35-32\\libs']
NOT AVAILABLE
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
c:\users\jon\appdata\local\programs\python\python35-32\lib\site-packages\num
py\distutils\system_info.py:639: UserWarning: Specified path C:\projects\windows
-wheel-builder\atlas-builds\atlas-3.10.1-sse2-32\lib is invalid.
warnings.warn('Specified path %s is invalid.' % d)
<class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
NOT AVAILABLE
atlas_3_10_info:
<class 'numpy.distutils.system_info.atlas_3_10_info'>
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
<class 'numpy.distutils.system_info.atlas_threads_info'>
NOT AVAILABLE
atlas_info:
<class 'numpy.distutils.system_info.atlas_info'>
NOT AVAILABLE
c:\users\jon\appdata\local\programs\python\python35-32\lib\site-packages\num
py\distutils\system_info.py:1548: UserWarning:
Atlas (http://math-atlas.sourceforge.net/) libraries not found.
Directories to search for the libraries can be specified in the
numpy/distutils/site.cfg file (section [atlas]) or by setting
the ATLAS environment variable.
warnings.warn(AtlasNotFoundError.__doc__)
lapack_info:
libraries lapack not found in ['c:\\users\\jon\\appdata\\local\\programs\\
python\\python35-32\\lib', 'C:\\', 'c:\\users\\jon\\appdata\\local\\programs\\py
thon\\python35-32\\libs']
NOT AVAILABLE
c:\users\jon\appdata\local\programs\python\python35-32\lib\site-packages\num
py\distutils\system_info.py:1559: UserWarning:
Lapack (http://www.netlib.org/lapack/) libraries not found.
Directories to search for the libraries can be specified in the
numpy/distutils/site.cfg file (section [lapack]) or by setting
the LAPACK environment variable.
warnings.warn(LapackNotFoundError.__doc__)
lapack_src_info:
NOT AVAILABLE
c:\users\jon\appdata\local\programs\python\python35-32\lib\site-packages\num
py\distutils\system_info.py:1562: UserWarning:
Lapack (http://www.netlib.org/lapack/) sources not found.
Directories to search for the sources can be specified in the
numpy/distutils/site.cfg file (section [lapack_src]) or by setting
the LAPACK_SRC environment variable.
warnings.warn(LapackSrcNotFoundError.__doc__)
NOT AVAILABLE
Running from scipy source directory.
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "C:\Users\Jon\AppData\Local\Temp\pip-build-ugbb8uwx\scipy\setup.py",
line 265, in <module>
setup_package()
File "C:\Users\Jon\AppData\Local\Temp\pip-build-ugbb8uwx\scipy\setup.py",
line 262, in setup_package
setup(**metadata)
File "c:\users\jon\appdata\local\programs\python\python35-32\lib\site-pack
ages\numpy\distutils\core.py", line 135, in setup
config = configuration()
File "C:\Users\Jon\AppData\Local\Temp\pip-build-ugbb8uwx\scipy\setup.py",
line 182, in configuration
config.add_subpackage('scipy')
File "c:\users\jon\appdata\local\programs\python\python35-32\lib\site-pack
ages\numpy\distutils\misc_util.py", line 1003, in add_subpackage
caller_level = 2)
File "c:\users\jon\appdata\local\programs\python\python35-32\lib\site-pack
ages\numpy\distutils\misc_util.py", line 972, in get_subpackage
caller_level = caller_level + 1)
File "c:\users\jon\appdata\local\programs\python\python35-32\lib\site-pack
ages\numpy\distutils\misc_util.py", line 909, in _get_configuration_from_setup_p
y
config = setup_module.configuration(*args)
File "scipy\setup.py", line 15, in configuration
config.add_subpackage('linalg')
File "c:\users\jon\appdata\local\programs\python\python35-32\lib\site-pack
ages\numpy\distutils\misc_util.py", line 1003, in add_subpackage
caller_level = 2)
File "c:\users\jon\appdata\local\programs\python\python35-32\lib\site-pack
ages\numpy\distutils\misc_util.py", line 972, in get_subpackage
caller_level = caller_level + 1)
File "c:\users\jon\appdata\local\programs\python\python35-32\lib\site-pack
ages\numpy\distutils\misc_util.py", line 909, in _get_configuration_from_setup_p
y
config = setup_module.configuration(*args)
File "scipy\linalg\setup.py", line 20, in configuration
raise NotFoundError('no lapack/blas resources found')
numpy.distutils.system_info.NotFoundError: no lapack/blas resources found
----------------------------------------
Command "c:\users\jon\appdata\local\programs\python\python35-32\python.exe -u -c
"import setuptools, tokenize;__file__='C:\\Users\\Jon\\AppData\\Local\\Temp\\pi
p-build-ugbb8uwx\\scipy\\setup.py';exec(compile(getattr(tokenize, 'open', open)(
__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record C:\
Users\Jon\AppData\Local\Temp\pip-uh3v7wvi-record\install-record.txt --single-ver
sion-externally-managed --compile" failed with error code 1 in C:\Users\Jon\AppD
ata\Local\Temp\pip-build-ugbb8uwx\scipy\
