It appears there is no equivalent to the trace option offered in the Java Control Panel for apps that are launched using the regular virtual machine. The options in the Java Control Panel are specifically for Java Web Start Apps and Java Applets. It has no effect on the Java Desktop Applications launched by double clicking an executable jar file or by typing java -jar javaapp.jar at the command line. While the documentation states that tracing is output from the java console to a .trace file the console to which they speak is the Java Console that is only available for Web Start and Applets. They are not speaking of just standard out and standard error. While both standard out and standard error does get output to the Java Console the Java Console also includes boot strap information of the JVM itself such as the java version, the exact path of the java executable file, proxy information and much more. I'm sure there may be a way to generate equivalent data it can not be done through the Java Control Panel's trace and log options or with Deployment Property options such as -DDeployment.trace = true. You can see the information I'm speaking of by going to the java tutorials and launching one of the many web start apps they link to in their tutorials. Make sure to go to the Java Control Panel and tick the Show Console option under the advanced tab. When you launch a Java Web Start App with this option selected the Java Console will open. The output to that console is what is dumped to the .trace file when Enable Tracing is selected in the same Advanced tab of the Java Control Panel. If you also enable logging it appears that console output is output to a .log file but in an XML format.