Understanding Parsing Error when reading model file into PySD

Question

I am receiving the following error message when I try to read a Vensim model file (.mdl) using Python's PySD package.

My code is:

import pysd
import os

os.chdir('path/to/model_file')

model = pysd.read_vensim('my_model.mdl')

The Error I receive is:

Traceback (most recent call last):
  Python Shell, prompt 13, line 1
  File "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pysd/pysd.py", line 53, in read_vensim
    py_model_file = translate_vensim(mdl_file)
  File "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pysd/vensim2py.py", line 673, in translate_vensim
    entry.update(get_equation_components(entry['eqn']))
  File "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pysd/vensim2py.py", line 251, in get_equation_components
    tree = parser.parse(equation_str)
  File "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/parsimonious/grammar.py", line 123, in parse
    return self.default_rule.parse(text, pos=pos)
  File "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/parsimonious/expressions.py", line 110, in parse
    node = self.match(text, pos=pos)
  File "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/parsimonious/expressions.py", line 127, in match
    raise error
parsimonious.exceptions.ParseError: Rule 'subscriptlist' didn't match at '' (line 1, column 21).

I have searched for this particular error and I cannot find much information on the failed matching rule for 'subscriptlist'.

I appreciate any insight. Thank you.

How big is your model? Small enough to display here for our examination? — Bill Bell, Sep 30 '16 at 15:49
No, unfortunately the model I am trying to use is very large. But there is no problem (i.e errors or warnings) that generate from running the model within Vensim (a simulation software where the model file was created), so I do not know where to even beginning looking for the solution. Any thoughts, anyone? — Cortney, Oct 11 '16 at 13:54
OK, I don't know you so please don't be offended. An ordinary debugging technique is to break up a big code into smaller pieces to find the part that's causing trouble. Can you do that? Or, can you omit a chunk of the model near the end to isolate the offending line(s)? — Bill Bell, Oct 11 '16 at 15:28

James Houghton · Answer 1 · 2016-10-19T14:42:55.087

Good news is that there is nothing wrong with your code. =) (Although you can also just include the path to the file in the .read_vensim call, if you don't want to make the dir change).

That being the case, there are a few possibilities that would cause this issue. One is if the model file is created with a sufficiently old version of Vensim, the syntax may be different from what the current parser is designed for. One way to get around this is to update Vensim and reload the model file there - Vensim will update to the current syntax.

If you are already using a recent version of Vensim (the parser was developed using syntax of Vensim 6.3E) then the parsing error may be due to a feature that isn't yet included. There are still some outstanding issues with subscripts, which you can read about here and here).

score 0 · Answer 2 · answered Oct 19 '16 at 14:43

If you aren't using subscripts, you may have found a bug in the parser. If so, best course is to create a report in the github issue tracker for the project. The stack trace you posted says that the error is happening in the first line of the file, and that the error has to do with how the right hand side of the equation is being parsed. You might include the first few lines in your bug report to help me recreate the issue. I'll add a case to our growing test suite and then we can make sure it isn't a problem going forwards.

Understanding Parsing Error when reading model file into PySD

2 Answers2