A very simple solution: Rather than putting the Javascript into the console, consider putting it in your application but disabling it when you're not debugging.
For example, you could have a GET parameter in your URL that, when present, triggers the function. A good explanation of how to retrieve a GET parameter in Javascript is at How to retrieve GET parameters from javascript?
An even simpler alternative would be to simply leave this code commented out, and comment it in when you want to debug. (This is not a good practice and I will scold you for it during code review, but it is a real thing that real people do, and it has the advantage of being easy and working.)
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An alternative: You could detect when the console is open, and only run your code when the console is detected (though this would annoy power users like me who tend to always have developer tools open). It's not trivial to detect, but there's a library you can use: https://github.com/zswang/jdetects