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is there way to check the output of the submitted job. The output files are written with quite big delay, so I want to be able to see if they are anything wrong going on.

I saw for PBS there was option -k oe to directly write the qsub output to file in home directory but could not find similar solution for my case.

jkhadka
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  • Is this Torque or SGE? The `-k` option is specific to Torque, but question is tagged sge. – Vince Apr 19 '17 at 14:22

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Based on what I find on Torque it would seem like this is not doable without configuring server:

Check real time output after qsub a job on cluster

PBS, refresh stdout

You may want to consider writing output to separate file from within the program and flush stdout accordingly.

Vince
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