First off, I've looked everywhere for an answer and couldn't find a solution.
I made a commit and pushed a lot of files and directories to my github pages that weren't supposed to be pushed. When I did "git status" I see a lot of untracked directories and files. When I did "git clean -df" it only removed files from the directory that I needed to have on my github pages. Right now, I'm stuck with all these untracked files and a git repo full of unwanted directories. Untracked Files