as the title says, building the docs for my package works locally fine but not on the server. I get the following error:
Traceback (most recent call last): File "/home/docs/checkouts/readthedocs.org/user_builds/crbm/envs/latest/lib/python2.7/site-packages/sphinx/cmdline.py", line 295, in main
opts.warningiserror, opts.tags, opts.verbosity, opts.jobs) File "/home/docs/checkouts/readthedocs.org/user_builds/crbm/envs/latest/lib/python2.7/site-packages/sphinx/application.py", line 163, in __init__
confoverrides or {}, self.tags) File "/home/docs/checkouts/readthedocs.org/user_builds/crbm/envs/latest/lib/python2.7/site-packages/sphinx/config.py", line 134, in __init__
execfile_(filename, config) File "/home/docs/checkouts/readthedocs.org/user_builds/crbm/envs/latest/lib/python2.7/site-packages/sphinx/util/pycompat.py", line 129, in execfile_
exec_(code, _globals) File "/home/docs/checkouts/readthedocs.org/user_builds/crbm/envs/latest/lib/python2.7/site-packages/six.py", line 709, in exec_
exec("""exec _code_ in _globs_, _locs_""") File "<string>", line 1, in <module> File "conf.py", line 23, in <module>
import secomo File "/home/docs/checkouts/readthedocs.org/user_builds/crbm/checkouts/latest/secomo/__init__.py", line 1, in <module>
from .convRBM import CRBM File "/home/docs/checkouts/readthedocs.org/user_builds/crbm/checkouts/latest/secomo/convRBM.py", line 2, in <module>
import theano File "/home/docs/checkouts/readthedocs.org/user_builds/crbm/envs/latest/lib/python2.7/site-packages/Theano-0.10.0b3-py2.7.egg/theano/__init__.py", line 110, in <module>
from theano.compile import ( File "/home/docs/checkouts/readthedocs.org/user_builds/crbm/envs/latest/lib/python2.7/site-packages/Theano-0.10.0b3-py2.7.egg/theano/compile/__init__.py", line 12, in <module>
from theano.compile.mode import * File "/home/docs/checkouts/readthedocs.org/user_builds/crbm/envs/latest/lib/python2.7/site-packages/Theano-0.10.0b3-py2.7.egg/theano/compile/mode.py", line 11, in <module>
import theano.gof.vm File "/home/docs/checkouts/readthedocs.org/user_builds/crbm/envs/latest/lib/python2.7/site-packages/Theano-0.10.0b3-py2.7.egg/theano/gof/vm.py", line 673, in <module>
from . import lazylinker_c File "/home/docs/checkouts/readthedocs.org/user_builds/crbm/envs/latest/lib/python2.7/site-packages/Theano-0.10.0b3-py2.7.egg/theano/gof/lazylinker_c.py", line 127, in <module>
preargs=args) File "/home/docs/checkouts/readthedocs.org/user_builds/crbm/envs/latest/lib/python2.7/site-packages/Theano-0.10.0b3-py2.7.egg/theano/gof/cmodule.py", line 2353, in compile_str
(status, compile_stderr.replace('\n', '. '))) Exception: Compilation failed (return status=1): /usr/bin/ld: /home/docs/.pyenv/versions/2.7.13/lib/libpython2.7.a(abstract.o): relocation R_X86_64_32S against `_Py_NotImplementedStruct' can not be used when making a shared object; recompile with -fPIC. /home/docs/.pyenv/versions/2.7.13/lib/libpython2.7.a: error adding symbols: Bad value. collect2: error: ld returned 1 exit status.
Exception occurred: File "/home/docs/checkouts/readthedocs.org/user_builds/crbm/envs/latest/lib/python2.7/site-packages/Theano-0.10.0b3-py2.7.egg/theano/gof/cmodule.py", line 2353, in compile_str
(status, compile_stderr.replace('\n', '. '))) Exception: Compilation failed (return status=1): /usr/bin/ld: /home/docs/.pyenv/versions/2.7.13/lib/libpython2.7.a(abstract.o): relocation R_X86_64_32S against `_Py_NotImplementedStruct' can not be used when making a shared object; recompile with -fPIC. /home/docs/.pyenv/versions/2.7.13/lib/libpython2.7.a: error adding symbols: Bad value. collect2: error: ld returned 1 exit status. The full traceback has been saved in /tmp/sphinx-err-I1fypA.log, if you want to report the issue to the developers. Please also report this if it was a user error, so that a better error message can be provided next time. A bug report can be filed in the tracker at <https://github.com/sphinx-doc/sphinx/issues>. Thanks!
You can find the C code in this temporary file: /tmp/theano_compilation_error_JSxqVj
It looks as if some flag for the python build in pyenv is responsible for the error as far as I understood it from this post.
This is supported by the fact that the Lasagne build seems to also be failing for the same reason.
However, what can I possibly do about it? Is it really a bug in Theano or has it to do with the setup of readthedocs.org and that they don't compile python with the --enable-shared flag?
Thanks!
Roman
