R: cannot allocate vector of size 10.4 Gb

Asked Nov 26 '17 at 00:51

Active Jun 03 '18 at 04:24

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Hi i am working with R package consensusclusterplus. And I got this error.

Error: cannot allocate vector of size 10.4 Gb

This is what I tried from the previous posts. But could not resolve. Can someone please help. Thanks. I have only one object in my work space.

memory.limit()

[1] 16062

memory.limit(size=112000)

[1] 112000

tresults = ConsensusClusterPlus(td, maxK=4, reps=100, pItem=0.8, pFeature=1, title=title, clusterAlg="km",distance="euclidean",seed=1262118388.71279,plot=NULL) Error: cannot allocate vector of size 10.4 Gb

asked Nov 26 '17 at 00:51

Goku

1

To confirm, you have enough ram on your machine to handle this, correct? – MichaelChirico Nov 26 '17 at 01:29
I thought I can use the second command to expand the memory.But that also didn't work. Any ways I just need 10GB. But my laptop has 16GB ram and this is still not working. – Goku Nov 27 '17 at 22:16
You better run your data on the cloud. AWS is a good option. – Enrico Dace Mar 04 '19 at 06:54

R: cannot allocate vector of size 10.4 Gb

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