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I need to split a tif image in patches. Images are in a gigapixel resolution and it takes really long on my machine.

Is it possible to use OpenSlide on Google Collaboratory?

vftw
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1 Answers1

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It is really easy. Just ran this:

!apt update && apt install -y openslide-tools
!pip install openslide-python
vftw
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  • were you able to use deepzoom in colab? i get an error that says it can't find openslide module – john Aug 20 '19 at 17:46
  • I keep getting the daunting error message: TileSourceException: No available tilesource for exapmle_image.ndpi although I know that this file is there and I could open it in other saturn (not google collaboration) instances. Anybody has an idea why? – AMM Jun 04 '20 at 13:54