I had this error when I tried to add a primary key to my table:
lost connection to MySQL server during query
And this is my query:
ALTER TABLE test ADD PRIMARY KEY (ORDER_ID);
My database configuration timeout:
+----------------------------+----------+
| Variable_name | Value |
+----------------------------+----------+
| connect_timeout | 10 |
| delayed_insert_timeout | 300 |
| innodb_lock_wait_timeout | 50 |
| innodb_rollback_on_timeout | OFF |
| interactive_timeout | 28800 |
| lock_wait_timeout | 31536000 |
| net_read_timeout | 30 |
| net_write_timeout | 60 |
| slave_net_timeout | 3600 |
| thread_pool_idle_timeout | 60 |
| wait_timeout | 28800 |
+----------------------------+----------+