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I have seen this post: How to create R-markdown sections inside a R code chunk? With proper code display

and one of the responders, Cedric, impressed me with the way he or she boxed the output of summary() command in R.

enter image description here

I understand that the user used Sweave to create such a great output. I am curious that whether there is a way to use Knit to output to a PDF file in the similar fashion.

Thank you!

Jo Mckenzie
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1 Answers1

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There's nothing special about Sweave vs. R Markdown here. You can copy and paste the LaTeX code from Cedric's answer that you linked to into a file example.sty and use the following R Markdown file

---
title: "Stack Overflow Answer"
author: "duckmayr"
header-includes:
    - \usepackage{example}
output: pdf_document
---


```{r boxed-summary, results='asis'}
for (i in 1:10) {
  cat("\\section{Part:", i, "}")
  cat("\\begin{lstlisting}")
  print(summary(lm(data=mtcars, mtcars[,1]~ mtcars[,i])))
  cat("\\end{lstlisting}")
  cat(paste0("$\\\\alpha$ = ", mtcars[1,i]))  
}
```

to create

enter image description here

Alternatively, you could put the LaTeX into the R Markdown document you're editing:

---
title: "Stack Overflow Answer"
author: "duckmayr"
header-includes:
    - \usepackage{listings}
    - \usepackage[usename,dvipsnames]{xcolor}
    - \definecolor{mygreen}{rgb}{0,0.6,0} 
    - \definecolor{mygray}{rgb}{0.5,0.5,0.5}
    - \definecolor{mymauve}{rgb}{0.58,0,0.82}
output: pdf_document
---

\lstset{ %
  backgroundcolor=\color{white},   % choose the background color; you must add \usepackage{color} or \usepackage{xcolor}
  basicstyle=\footnotesize\ttfamily, % the size of the fonts that are used for the
  % code
  breakatwhitespace=false,         % sets if automatic breaks should only happen at whitespace
  breaklines=true,                 % sets automatic line breaking
  captionpos=b,                    % sets the caption-position to bottom
  commentstyle=\color{mygreen},      % comment style
  deletekeywords={...},            % if you want to delete keywords from the given language
  escapeinside={\%*}{*)},          % if you want to add LaTeX within your code
  extendedchars=true,              % lets you use non-ASCII characters; for 8-bits encodings only, does not work with UTF-8
  frame=single,                    % adds a frame around the code
  keepspaces=true,                 % keeps spaces in text, useful for keeping indentation of code (possibly needs columns=flexible)
  keywordstyle=\color{blue},       % keyword style
  language=R,                       % the language of the code
  morekeywords={*,...},            % if you want to add more keywords to the set
  numbers=left,                    % where to put the line-numbers; possible values are (none, left, right)
  numbersep=5pt,                   % how far the line-numbers are from the code
  numberstyle=\tiny\color{mygray},   % the style that is used for the line-numbers
  rulecolor=\color{black},         % if not set, the frame-color may be changed on line-breaks within not-black text (e.g. comments (green here))
  showspaces=false,                % show spaces everywhere adding particular underscores; it overrides 'showstringspaces'
  showstringspaces=false,          % underline spaces within strings only
  showtabs=false,                  % show tabs within strings adding particular underscores
  stepnumber=2,                    % the step between two line-numbers. If it is 1, each line will be numbered
  stringstyle=\color{mymauve},      % string literal style
  tabsize=2,                       % sets default tabsize to 2 spaces
  title=\lstname                   % show the filename of files included with \lstinputlisting; also try caption instead of title
}

```{r boxed-summary, results='asis'}
for (i in 1:10) {
  cat("\\section{Part:", i, "}")
  cat("\\begin{lstlisting}")
  print(summary(lm(data=mtcars, mtcars[,1]~ mtcars[,i])))
  cat("\\end{lstlisting}")
  cat(paste0("$\\\\alpha$ = ", mtcars[1,i]))  
}
```

which results in the same output.

Attribution Note

I want to re-emphasize here that I did not come up with the LaTeX code that creates the boxed listing; Cedric did that as mentioned above. I merely demonstrate here for the OP how to use that code in an R Markdown document rather than via Sweave as was demonstrated in the linked answer.

duckmayr
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  • How about when I use libraries from R? I have some issues right now. – Jo Mckenzie Sep 28 '19 at 21:47
  • @JoMckenzie There shouldn't be any issue using R packages in your code. If you're running into issues doing that, my suggestion would be to open a new question. – duckmayr Sep 28 '19 at 22:43