I'm having trouble running pytest on my package. I have the following structure...
tree -f
.
├── [ 0 Jan 4 22:04] ./__init__.py
├── [ 34K Jan 12 11:37] ./LICENSE
├── [1.4K Jan 6 07:43] ./README.md
├── [1.1K Jan 12 11:42] ./setup.cfg
├── [ 79 Jan 6 08:22] ./setup.py
├── [4.0K Jan 12 11:49] ./tcx2gpx
│ ├── [ 701 Jan 6 23:13] ./tcx2gpx/__init__.py
│ ├── [4.0K Jan 12 12:13] ./tcx2gpx/__pycache__
│ │ ├── [ 683 Jan 12 12:13] ./tcx2gpx/__pycache__/__init__.cpython-36.pyc
│ │ └── [3.0K Jan 6 21:00] ./tcx2gpx/__pycache__/tcx2gpx.cpython-36.pyc
│ └── [3.1K Jan 12 11:49] ./tcx2gpx/tcx2gpx.py
├── [4.0K Jan 4 21:52] ./tests
│ ├── [4.0K Jan 6 06:32] ./tests/resources
│ │ ├── [288K Jan 6 21:07] ./tests/resources/2019-10-20 12:51:21.0.gpx
│ │ └── [816K Jan 4 22:03] ./tests/resources/2019-10-20 12:51:21.0.tcx
│ └── [4.0K Jan 12 12:24] ./tests/tcx2gpx
│ ├── [ 386 Jan 12 12:17] ./tests/tcx2gpx/conftest.py
│ ├── [ 0 Jan 12 11:48] ./tests/tcx2gpx/__init__.py
│ └── [1.3K Jan 12 12:24] ./tests/tcx2gpx/test_tcx2gpx.py
└── [4.0K Jan 6 06:21] ./tmp
├── [288K Jan 6 06:21] ./tmp/2019-10-20 12:51:21.0.gpx
└── [ 415 Jan 5 08:38] ./tmp/test.py
And my conftest.py has the follwoing...
"""
Fixtures for test_tcx2gpx
"""
from pathlib import Path
import pytest
from tcx2gpx.tcx2gpx import TCX2GPX
TCX_DIR = Path(__file__).resolve().parents[1]
TCX_FILE = TCX_DIR / 'resources' / '2019-10-20 12:51:21.0.tcx'
GPX_FILE = TCX_DIR / 'resources' / '2019-10-20 12:51:21.0.gpx'
@pytest.fixture
def tcx_file():
"""
Fixture of TCX file
"""
return TCX2GPX(TCX_FILE)
On running pytest from the top-level I'm informed...
____________________________________________________ ERROR collecting test session ____________________________________________________
/home/neil/.virtualenvs/default/lib/python3.6/site-packages/_pytest/config/__init__.py:458: in _importconftest
return self._conftestpath2mod[key]
E KeyError: PosixPath('/mnt/work/python/tcx2gpx/tests/tcx2gpx/conftest.py')
During handling of the above exception, another exception occurred:
/home/neil/.virtualenvs/default/lib/python3.6/site-packages/_pytest/config/__init__.py:464: in _importconftest
mod = conftestpath.pyimport()
/home/neil/.virtualenvs/default/lib/python3.6/site-packages/py/_path/local.py:701: in pyimport
__import__(modname)
/home/neil/.virtualenvs/default/lib/python3.6/site-packages/_pytest/assertion/rewrite.py:143: in exec_module
exec(co, module.__dict__)
tests/tcx2gpx/conftest.py:7: in <module>
from tcx2gpx.tcx2gpx import TCX2GPX
E ModuleNotFoundError: No module named 'tcx2gpx.tcx2gpx'
Reading around I found a few threads on this (e.g. here) and because I'm working on CI on GitLab I decided to try modifying the PYTHONPATH (as I can put these as part of the script that is executed on GitLab CI execution)...
export PYTHONPATH="$PYTHONPATH:."
python -c "import sys;print(sys.path)"
['', '/mnt/work/python/tcx2gpx', '/home/neil/.virtualenvs/default/lib64/python
36.zip', '/home/neil/.virtualenvs/default/lib64/python3.6', '/home/neil/.virtualenvs/default/lib64/python3.6/lib
-dynload', '/usr/lib64/python3.6', '/usr/lib/python3.6', '/home/neil/.virtualenvs/default/lib/python3.6/site-pac
kages', '/mnt/work/python/python-tcxparser']
pytest
But I get the same error, even though /mnt/work/python/tcx2gpx where the above directory structure is located, is in the PYTHONPATH.
I have also tried using python -m pytest because, as stated here doing so should automatically include the current directory in syspath. I get the same result though, ModuleNotFoundError.
I also found this article which describes conflicts between a system installed pytest and that within a virtual environment, but firstly I can not uninstall it at the system level because its a required dependency of other packages I have installed in the system, and secondly I get the same error when trying to run the tests in GitLab CI where I don't think there is any other version of pytest installed (I have to explicitly install it as part of the testing stage).
Really stumped on why this isn't working any suggestions or pointers would be very much appreciated.
