I run into this same problem. I am using Pycharm on Windows 10 with a conda environment. I used pip to install the packages in my requirements.txt file.
I am using Shapely which depends on geos. It seems pip did not install that dependency, so what I did was to first remove Shapely with:
pip uninstall shapely
Then, I used conda to install the package (geos gets installed too), and everything works fine.
conda install shapely
I think if you use pip, you can just install geos individually if it is not installed (I did not test):
pip install geos