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How can I highlight weekends in a small multiples?

I've read different threads (e.g. (1) and (2)) but couldn't figure out how to implement it into my case, since I work with small multiples where I iterate through the DateTimeIndex to every month (see code below figure). My data Profiles is for this case a time-series of 2 years with an interval of 15min (i.e. 70080 datapoints).

However, weekend days occuring at the end of the month and therefore generate an error; in this case: IndexError: index 2972 is out of bounds for axis 0 with size 2972

enter image description here

My attempt: [Edited - with suggestions by @Patrick FitzGerald]

In [10]:
class highlightWeekend:
    '''Class object to highlight weekends'''
    def __init__(self, period):
        self.ranges= period.index.dayofweek >= 5
        self.res = [x for x, (i , j) in enumerate(zip( [2] + list(self.ranges), list(self.ranges) + [2])) if i != j]
        if self.res[0] == 0 and self.ranges[0] == False:
            del self.res[0]
        if self.res[-1] == len(self.ranges) and self.ranges[-1] == False:
            del self.res[-1]

months= Profiles.loc['2018'].groupby(lambda x: x.month)
fig, axs= plt.subplots(4,3, figsize= (16, 12), sharey=True)
axs= axs.flatten()
for i, j in months:
    axs[i-1].plot(j.index, j)
    if i < len(months):
        k= 0
        while k < len(highlightWeekend(j).res):
            axs[i-1].axvspan(j.index[highlightWeekend(j).res[k]], j.index[highlightWeekend(j).res[k+1]], alpha=.2)
            k+=2
    i+=1
plt.show()

[Out 10]:

enter image description here

Question How to solve the issue of the weekend day occuring at the end of the month ?

rclee
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1 Answers1

2

TL;DR Skip to Solution for method 2 to see the optimal solution, or skip to the last example for a solution with a single pandas line plot. In all three examples, weekends are highlighted using just 4-6 lines of code, the rest is for formatting and reproducibility.



Methods and tools

I am aware of two methods to highlight weekends on plots of time series, which can be applied both to single plots and to small multiples by looping over the array of subplots. This answer presents solutions for highlighting weekends but they can be easily adjusted to work for any recurring period of time.


Method 1: highlight based on the dataframe index

This method follows the logic of the code in the question and in the answers in the linked threads. Unfortunately, a problem arises when a weekend day occurs at the end of the month, the index number that is needed to draw the full span of the weekend exceeds the index range which produces an error. This issue is solved in the solution shown further below by computing the time difference between two timestamps and adding it to each timestamp of the DatetimeIndex when looping over them to highlight the weekends.

But two issues remain, i) this method does not work for time series with a frequency of more than a day, and ii) time series based on frequencies less than hourly (like 15 minutes) will require the drawing of many polygons which hurts performance. For these reasons, this method is presented here for the purpose of documentation and I suggest using instead method 2.


Method 2: highlight based on the x-axis units

This method uses the x-axis units, that is the number of days since the time origin (1970-01-01), to identify the weekends independently from the time series data being plotted which makes it much more flexible than method 1. The highlights are drawn for each full weekend day only, making this two times faster than method 1 for the examples presented below (according to a %%timeit test in Jupyter Notebook). This is the method I recommend using.


Tools in matplotlib that can be used to implement both methods

axvspan link demo, link API (used in Solution for method 1)

broken_barh link demo, link API

fill_between link demo, link API (used in Solution for method 2)

BrokenBarHCollection.span_where link demo, link API

To me, it seems that fill_between and BrokenBarHCollection.span_where are essentially the same. Both provide the handy where argument which is used in the solution for method 2 presented further below.



Solutions

Here is a reproducible sample dataset used to illustrate both methods, using a frequency of 6 hours. Note that the dataframe contains data only for one year which makes it possible to select the monthly data simply with df[df.index.month == month] to draw each subplot. You will need to adjust this if you are dealing with a multi-year DatetimeIndex.

Import packages used for all 3 examples and create the dataset for the first 2 examples

import numpy as np                   # v 1.19.2
import pandas as pd                  # v 1.1.3
import matplotlib.pyplot as plt      # v 3.3.2
import matplotlib.dates as mdates  # used only for method 2

# Create sample dataset
rng = np.random.default_rng(seed=1) # random number generator
dti = pd.date_range('2018-01-01 00:00', '2018-12-31 23:59', freq='6H')
consumption = rng.integers(1000, 2000, size=dti.size)
df = pd.DataFrame(dict(consumption=consumption), index=dti)

Solution for method 1: highlight based on the dataframe index

In this solution, the weekends are highlighted using axvspan and the DatetimeIndex of the monthly dataframes df_month. The weekend timestamps are selected with df_month.index[df_month.weekday>=5].to_series() and the problem of exceeding the index range is solved by computing the timedelta from the frequency of the DatetimeIndex and adding it to each timestamp.

Of course, axvspan could also be used in a smarter way than shown here so that each weekend highlight is drawn in a single go, but I believe this would result in a less flexible solution and more code than what is presented in Solution for method 2.

# Draw and format subplots by looping through months and flattened array of axes
fig, axs = plt.subplots(4, 3, figsize=(10, 9), sharey=True)
for month, ax in zip(df.index.month.unique(), axs.flat):
    # Select monthly data and plot it
    df_month = df[df.index.month == month]
    ax.plot(df_month.index, df_month['consumption'])
    ax.set_ylim(0, 2500) # set limit similar to plot shown in question
    
    # Draw vertical spans for weekends: computing the timedelta and adding it
    # to the date solves the problem of exceeding the df_month.index
    timedelta = pd.to_timedelta(df_month.index.freq)
    weekends = df_month.index[df_month.index.weekday>=5].to_series()
    for date in weekends:
        ax.axvspan(date, date+timedelta, facecolor='k', edgecolor=None, alpha=.1)
    
    # Format tick labels
    ax.set_xticks(ax.get_xticks())
    tk_labels = [pd.to_datetime(tk, unit='D').strftime('%d') for tk in ax.get_xticks()]
    ax.set_xticklabels(tk_labels, rotation=0, ha='center')
    
    # Add x labels for months
    ax.set_xlabel(df_month.index[0].month_name().upper(), labelpad=5)
    ax.xaxis.set_label_position('top')

# Add title and edit spaces between subplots
year = df.index[0].year
freq = df_month.index.freqstr
title = f'{year} consumption displayed for each month with a {freq} frequency'
fig.suptitle(title.upper(), y=0.95, fontsize=12)
fig.subplots_adjust(wspace=0.1, hspace=0.5)

fig.text(0.5, 0.99, 'Weekends are highlighted by using the DatetimeIndex',
         ha='center', fontsize=14, weight='semibold');

method1_axvspan

As you can see, the weekend highlights end where the data ends as illustrated with the month of March. This is of course not noticeable if the DatetimeIndex is used to set the x-axis limits.



Solution for method 2: highlight based on the x-axis units

This solution uses the x-axis limits to compute the range of time covered by the plot in terms of days, which is the unit used for matplotlib dates. A weekends mask is computed and then passed to the where argument of the fill_between plotting function. The True values of the mask are processed as right-exclusive so in this case, Mondays must be included for the highlights to be drawn up to Mondays 00:00. Because plotting these highlights can alter the x-axis limits when weekends occur near the limits, the x-axis limits are set back to the original values after plotting.

Note that with fill_between the y1 and y2 arguments must be given. For some reason using the default y-axis limits leaves a small gap between the plot frame and the tops and bottoms of the weekend highlights. Here, the y limits are set to 0 and 2500 just to create an example similar to the one in the question but the following should be used instead for general cases: ax.set_ylim(*ax.get_ylim()).

# Draw and format subplots by looping through months and flattened array of axes
fig, axs = plt.subplots(4, 3, figsize=(10, 9), sharey=True)
for month, ax in zip(df.index.month.unique(), axs.flat):
    # Select monthly data and plot it
    df_month = df[df.index.month == month]
    ax.plot(df_month.index, df_month['consumption'])
    ax.set_ylim(0, 2500) # set limit like plot shown in question, or use next line
#     ax.set_ylim(*ax.get_ylim())
    
    # Highlight weekends based on the x-axis units, regardless of the DatetimeIndex
    xmin, xmax = ax.get_xlim()
    days = np.arange(np.floor(xmin), np.ceil(xmax)+2)
    weekends = [(dt.weekday()>=5)|(dt.weekday()==0) for dt in mdates.num2date(days)]
    ax.fill_between(days, *ax.get_ylim(), where=weekends, facecolor='k', alpha=.1)
    ax.set_xlim(xmin, xmax) # set limits back to default values
     
    # Create appropriate ticks with matplotlib date tick locator and formatter
    tick_loc = mdates.MonthLocator(bymonthday=np.arange(1, 31, step=5))
    ax.xaxis.set_major_locator(tick_loc)
    tick_fmt = mdates.DateFormatter('%d')
    ax.xaxis.set_major_formatter(tick_fmt)
    
    # Add x labels for months
    ax.set_xlabel(df_month.index[0].month_name().upper(), labelpad=5)
    ax.xaxis.set_label_position('top')

# Add title and edit spaces between subplots
year = df.index[0].year
freq = df_month.index.freqstr
title = f'{year} consumption displayed for each month with a {freq} frequency'
fig.suptitle(title.upper(), y=0.95, fontsize=12)
fig.subplots_adjust(wspace=0.1, hspace=0.5)
fig.text(0.5, 0.99, 'Weekends are highlighted by using the x-axis units',
         ha='center', fontsize=14, weight='semibold');

method2_fillbetween

As you can see, the weekends are always highlighted to the full extent, regardless of where the data starts and ends.



Additional example of a solution for method 2 with a monthly time series and a pandas plot

This plot may not make much sense but it serves to illustrate the flexibility of method 2 and how to make it compatible with a pandas line plot. Note that the sample dataset uses a month start frequency so that the default ticks are aligned with the data points.

# Create sample dataset with a month start frequency
rng = np.random.default_rng(seed=1) # random number generator
dti = pd.date_range('2018-01-01 00:00', '2018-06-30 23:59', freq='MS')
consumption = rng.integers(1000, 2000, size=dti.size)
df = pd.DataFrame(dict(consumption=consumption), index=dti)

# Draw pandas plot: x_compat=True converts the pandas x-axis units to matplotlib
# date units
ax = df.plot(x_compat=True, figsize=(10, 4), legend=None)
ax.set_ylim(0, 2500) # set limit similar to plot shown in question, or use next line
# ax.set_ylim(*ax.get_ylim())
    
# Highlight weekends based on the x-axis units, regardless of the DatetimeIndex
xmin, xmax = ax.get_xlim()
days = np.arange(np.floor(xmin), np.ceil(xmax)+2)
weekends = [(dt.weekday()>=5)|(dt.weekday()==0) for dt in mdates.num2date(days)]
ax.fill_between(days, *ax.get_ylim(), where=weekends, facecolor='k', alpha=.1)
ax.set_xlim(xmin, xmax) # set limits back to default values

# Additional formatting
ax.figure.autofmt_xdate(rotation=0, ha='center')
ax.set_title('2018 consumption by month'.upper(), pad=15, fontsize=12)

ax.figure.text(0.5, 1.05, 'Weekends are highlighted by using the x-axis units',
               ha='center', fontsize=14, weight='semibold');

method2_fillbetween_pandas



You can find more examples of this solution in the answers I have posted here and here. References: this answer by Nipun Batra, this answer by BenB, matplotlib.dates

Patrick FitzGerald
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  • Thank you for your answer, I'll keep your method in mind since it looks easier to handle months. I've implemented your suggestions into my part of the script, but still can't figure out how to counter the error of weekend day occuring at the end of the month: `IndexError: index ... is out of bounds` .. Any suggestion, since i do not use `.mdates` ? Or is that the only way – rclee Feb 03 '21 at 09:40
  • I am not aware of any other convenient way to solve the index error seeing as `axvspan` needs to get an `xmax` value from somewhere. Now in your particular case where you are dealing with a frequency of 15 minutes, you could simply decide to not include the last 15 minutes of the weekend days causing the error and this would not be noticeable in the plots contrary to my example with a 6-hour frequency. In the code above, the `axvspan` loop could be changed/interrupted like this: `for idx in indices_weekends: if idx != len(df_month)-1: ax.axvspan(df_month.index[idx], df_month.index[idx+1],...)` – Patrick FitzGerald Feb 03 '21 at 10:57
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    Though I must add that, unless there is any particular reason preventing you from using the matplotlib dates module, if I were in your shoes I would just use the code shared above by simply replacing `df` by `Profiles.loc['2018']`. By using this approach with `mdates`, the code can be reused for time series of any frequency up to 'day' without any risk of ending up with uneven vertical spans for weekends and, in addition to this, the ticks can be conveniently formatted. – Patrick FitzGerald Feb 03 '21 at 11:00
  • @rclee I have updated my answer to provide a better solution (see method 2) and make it more canonical. In case my answer has not yet helped you solve your problem, I am happy to provide more explanations. – Patrick FitzGerald Feb 04 '21 at 15:24
  • Perfect! I have implemented your previous solution in my script, as it exactly reproduces the desired results.The other solutions are indeed shorter, which benefits the calculation time. [Out of curiosity, I would still like to know what is missing in my code to get the desired result... but I'll leave that for my to-do list) Again thank you for your clear explanation, much appriciated! – rclee Feb 04 '21 at 23:54
  • @rclee Happy to have been of help! I am afraid that I am not able to look deeper into your code to find how to fix it as I am not familiar enough with classes to easily understand what is going on exactly. Another thing, I realized thanks to [this answer by BenB](https://stackoverflow.com/a/65172399/14148248) that in the solution for method 1, the dates do not need to be converted to numbers for `axvspan` seeing as a Timedelta object can be added to the date timestamp (instead of using `xmin+x_tdelta` as before). I have updated this solution to simplify it and make it fully 'mdates free' . – Patrick FitzGerald Feb 05 '21 at 23:16