1

I tried installing the Scanpy package on Jupyter with "pip install Scanpy" but I got the the errors below;

ERROR: pynndescent 0.5.2 has requirement numba>=0.51.2, but you'll have numba 0.48.0 which is incompatible. ERROR: umap-learn 0.5.1 has requirement numba>=0.49, but you'll have numba 0.48.0 which is incompatible

When I tried to separately install an upgraded version of numba, I got the error below;

ERROR: Cannot uninstall 'llvmlite'. It is a distutils installed project and thus we cannot accurately determine which files belong to it which would lead to only a partial uninstall.

Ola
  • 13
  • 1
  • 3

2 Answers2

3
  1. Run pip install --upgrade numba
  2. Run pip install scanpy
Linux Geek
  • 957
  • 1
  • 11
  • 19
0

you can try install with pip install -c numba numba=0.51.2.1rc1 if it doesn't work for you alternativly install RUN pip install llvmlite --ignore installed before pip install numba. HAVE A GOOD DAY:)

Ege ENGİNDENİZ
  • 16
  • 1