I have a Snakemake profile that turns input data into output data based on defined rules.
One of the input files has been modified through git, but I don't want rules that use it as input to treat it as modified (the changes are irrelevant here). How do I do this?
A related question is this one, but there the question is asked in a way that I find confusing. The answers are valid though. https://stackoverflow.com/a/56804496/7483211