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I am using python doit module as a GNU make replacement. Seems that doit is running actions on /bin/sh:

pedro@Gen83-ubuntu:~$ echo $SHELL
/bin/bash
pedro@Gen83-ubuntu:~$ doit merge_phased
.  phase_dataset:15
/bin/sh: 1: [[: not found
TaskError - taskid:phase_dataset:15
Command error: '[[ ! -d phasing ]] && mkdir phasing' returned 127

########################################
phase_dataset:15 <stdout>:

I would like to use /bin/bash. I could not find how to accomplish that in the documentation.

Pedro Inácio
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1 Answers1

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if its a sh file then you can add this at the top to run with bash

#!/bin/bash

or

#!/bin/ksh

to run with ksh

gladiator
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