Context: I have a class, E (think of it as an organism) and a struct, H (a single cell within the organism). The goal is to estimate some characterizing parameters of E. H has some properties that are stored in multi-dimensional matrices. But, the dimensions depend on the parameters of E.
E reads a set of parameters from an input file, declares some objects of type H, solves each of their problems and fills the matrices, computes a likelihood function, exports it, and moves on to next set of parameters.
What I used to do: I used to declare pointers to pointers to pointers in H's header, and postpone memory allocation to H's constructor. This way, E could pass parameters to constructor, and memory allocation could be done afterwards. I de-allocated memory in the destructor.
Problem: Yesterday, I realized this is bad practice! So, I decided to try vectors. I have read several tutorials. At the moment, the only thing that I can think of is using push_back() as used in the question here. But, I have a feeling that this might not be the best practice (as mentioned by many, e.g., here, under method 3).
There are tens of questions that are tangent to this, but none answers this question directly: What is the best practice if dimensions are not known in advance?
Any suggestion helps: Do I have any other solution? Should I stick to arrays?