yarn 2 (berry) doesn't use .yarnrc.yml from home directory

Question

I would like to use npmAuthToken from .yarnrc.yml which is located in my home directory

~/.yarnrc.yml content

npmScopes:
  company:
    npmAuthToken: NpmToken.token

~/Project/MyProject/.yarnrc.yml content

enableGlobalCache: true

logFilters:
  - code: YN0013
    level: discard

nodeLinker: node-modules

npmScopes:
  company:
    npmAlwaysAuth: true
    npmPublishRegistry: "https://company-url"
    npmRegistryServer: "https://company-url"

plugins:
  - path: .yarn/plugins/@yarnpkg/plugin-workspace-tools.cjs
    spec: "@yarnpkg/plugin-workspace-tools"

yarnPath: .yarn/releases/yarn-3.1.0.cjs

However, when I try to run yarn install it fails on the resolution step with the following message: Invalid authentication (as an anonymous user). It worked fine with yarn 1 and ~/.npmrc file. Now we're going to migrate yarn 2, but I stuck with this issue. Any ideas on how to solve this? Thanks!