I want to annotate my pheatmap, but the annotations doesn't show and I am not getting any error message.
I used the code below:
anno = t(data.frame(df[,c("disease")]))
ph = pheatmap(df, annotation = anno)
ph
Really appreciate help with this!
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1Can you provide a sample dataset using `dput(df)` – Nad Pat Apr 11 '22 at 16:14
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Thanks for answeringI work in TSD so cannot export, but I have the; dim(df) 174 97, str(df) - all numeric. Dim(anno) 174 1, str(anno) chr. Can i prove other info that is helpful? If I do pheatmap(df) it shows the same as with the code aboce - the heatmap without annotations. – – Maria Apr 12 '22 at 18:02
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Use `head(dput(df))`and then copy and paste the data in your question. Refer https://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example – Nad Pat Apr 13 '22 at 02:30