mamba equivalent of `conda shell.bash hook`

Question

I'd like to use mamba activate [env] in a shell script.

What would be the equivalent of conda shell.bash hook? I've tried mamba shell.bash hook and mamba shell hook -s posix.

Why do you need this? Sounds XY-ish to me. – merv May 26 '22 at 14:40 — merv, May 26 '22 at 14:40

score 1 · Answer 1 · answered Jan 26 '23 at 12:54

You can initialize mamba in your shell with the command mamba init.

However, you may want to run the hook subcommand in a non-interactive bash script where you need to activate an environment. There's no equivalent of conda shell.bash hook for mamba. To initialize mamba "on the fly", you must source the file $MAMBA_ROOT_PREFIX/etc/profile.d/mamba.sh, for example: source ~/miniconda3/etc/profile.d/mamba.sh.

You want to do this after initializing conda with eval "$(conda shell.bash hook)".

score 0 · Answer 2 · answered Aug 23 '23 at 17:34

0

By specifying the full path to your mamba installation, the following works:

source ~/.lib/mamba/bin/activate [env]

answered Aug 23 '23 at 17:34

spawn

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mamba equivalent of `conda shell.bash hook`

2 Answers2