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I am attempting to install and use rmats2sashimiplot (https://github.com/Xinglab/rmats2sashimiplot) which requires several python dependencies installed as well. When trying to install pysam using pip, I am receiving the error "python setup.py egg_info" as seen in the screenshot below. I have tried uninstalling and reinstalling setuptools on python. Any help is appreciated. Thank you. Note: I am working on a Debian bash shell on Windows 10, and I cannot use python or pip without typing "python.exe" or "pip.exe", so the command "sudo pip.exe" does not seem to be recognized even though I have added all the python directories to PATH.

error-message

Yvette Moreno
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  • Please clarify your specific problem or provide additional details to highlight exactly what you need. As it's currently written, it's hard to tell exactly what you're asking. – Community Jun 03 '22 at 19:52
  • Perhaps it's this pysam Windows install issue? https://stackoverflow.com/a/60199392/3944171 – Nick W Nov 01 '22 at 14:40

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