I am fairly new to terminal and anaconda so please bear with me. My system is Ubuntu 20.04.
I am attempting to run an algorithm that I installed from github. The command line is as follows.
snakemake --configfile test/config/simulation.yml --jobs 1 --use-conda --conda-frontend conda
Steps that have led me here... I downloaded anaconda3, installed it and setup the base environment. I git cloned a repository from github that runs through snakemake. I activated the snakemake environment and ran that previous line. After a few minutes I am left with many lines of red with this at the end...
feature:/linux-64::__glibc==2.31=0
- feature:|@/linux-64::__glibc==2.31=0
- biopython=1.76 -> libgcc-ng[version='>=7.3.0'] -> __glibc[version='>=2.17']
- pandas=1.0 -> libgcc-ng[version='>=7.5.0'] -> __glibc[version='>=2.17']
- pysam=0.16.0.1 -> libgcc-ng[version='>=9.3.0'] -> __glibc[version='>=2.17']
- scipy=1.5.1 -> libgcc-ng[version='>=7.5.0'] -> __glibc[version='>=2.17']
I truly just don't know what these mean. Anaconda and the files from the repository are the only things that I have on this computer so I don't believe other packages are interfering.
Any help would be much appreciated. As stated, I am new to all of this so simple terms would be helpful. I can provide any other necessary information, but I am not sure what is useful to solve this problem. Thank you!
