Please suggestion, I want to get started from 0. I do have experience on R.
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What's wrong with the documentation available at http://www.bioperl.org ? I found a HOWTO for beginners, and installation instructions for various platforms. If you're looking to learn perl, try http://www.perl.org/books/library.html for some free online textbooks.

entitledX
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The book Mastering Perl for Bioinformatics has a chapter on BioPerl. That chapter is available as a sample from Oreilly.

David Nehme
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