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I am trying to create a conda environment using a yml file on a remote linux server.

I run the command conda env create --name env1 -f environment.yml.

I first tried with miniconda3 installed on the server. Then I get the following errors after running the above command.

/miniconda3/lib/python3.8/site-packages/_distutils_hack/__init__.py:33: UserWarning: Setuptools is replacing distutils.
  warnings.warn("Setuptools is replacing distutils.")
Traceback (most recent call last):
  File "/miniconda3/lib/python3.8/site-packages/conda/gateways/connection/__init__.py", line 8, in <module>
    from requests import ConnectionError, HTTPError, Session
  File "/miniconda3/lib/python3.8/site-packages/requests/__init__.py", line 45, in <module>
    from .exceptions import RequestsDependencyWarning
  File "/miniconda3/lib/python3.8/site-packages/requests/exceptions.py", line 9, in <module>
    from .compat import JSONDecodeError as CompatJSONDecodeError
  File "/miniconda3/lib/python3.8/site-packages/requests/compat.py", line 40, in <module>
    from simplejson import JSONDecodeError
ImportError: cannot import name 'JSONDecodeError' from 'simplejson' (unknown location)

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/miniconda3/bin/conda-env", line 6, in <module>
    from conda_env.cli.main import main
  File "/miniconda3/lib/python3.8/site-packages/conda_env/cli/main.py", line 13, in <module>
    import conda.exports  # noqa
  File "/miniconda3/lib/python3.8/site-packages/conda/exports.py", line 24, in <module>
    from . import plan  # noqa: F401
  File "/miniconda3/lib/python3.8/site-packages/conda/plan.py", line 24, in <module>
    from .core.index import LAST_CHANNEL_URLS, _supplement_index_with_prefix
  File "/miniconda3/lib/python3.8/site-packages/conda/core/index.py", line 14, in <module>
    from .package_cache_data import PackageCacheData
  File "/miniconda3/lib/python3.8/site-packages/conda/core/package_cache_data.py", line 16, in <module>
    from .path_actions import CacheUrlAction, ExtractPackageAction
  File "/miniconda3/lib/python3.8/site-packages/conda/core/path_actions.py", line 30, in <module>
    from ..gateways.connection.download import download
  File "/miniconda3/lib/python3.8/site-packages/conda/gateways/connection/__init__.py", line 21, in <module>
    from pip._vendor.requests import ConnectionError, HTTPError, Session
ModuleNotFoundError: No module named 'pip._vendor.requests'

Then I installed anaconda3 and run the command again. then I get the following error.

/home/ebrar.bozkurt/.local/lib/python3.10/site-packages/_distutils_hack/__init__.py:33: UserWarning: Setuptools is replacing distutils.
  warnings.warn("Setuptools is replacing distutils.")
/home/ebrar.bozkurt/.local/lib/python3.10/site-packages/_distutils_hack/__init__.py:33: UserWarning: Setuptools is replacing distutils.
  warnings.warn("Setuptools is replacing distutils.")
Traceback (most recent call last):
  File "../anaconda3/bin/conda-env", line 6, in <module>
    from conda_env.cli.main import main
  File "/home/e/anaconda3/lib/python3.10/site-packages/conda_env/cli/main.py", line 42, in <module>
    from . import main_create
  File "/home/e/anaconda3/lib/python3.10/site-packages/conda_env/cli/main_create.py", line 17, in <module>
    from conda.notices import notices
  File "/home/e/anaconda3/lib/python3.10/site-packages/conda/notices/__init__.py", line 3, in <module>
    from .core import notices  # noqa: F401
  File "/home/e/anaconda3/lib/python3.10/site-packages/conda/notices/core.py", line 15, in <module>
    from . import fetch
  File "/home/e/anaconda3/lib/python3.10/site-packages/conda/notices/fetch.py", line 8, in <module>
    import requests
  File "/home/e/anaconda3/lib/python3.10/site-packages/requests/__init__.py", line 45, in <module>
    from .exceptions import RequestsDependencyWarning
  File "/home/e/anaconda3/lib/python3.10/site-packages/requests/exceptions.py", line 9, in <module>
    from .compat import JSONDecodeError as CompatJSONDecodeError
  File "/home/e/anaconda3/lib/python3.10/site-packages/requests/compat.py", line 40, in <module>
    from simplejson import JSONDecodeError
ImportError: cannot import name 'JSONDecodeError' from 'simplejson' (unknown location)

I searched for the solutions and found How to fix "Distutils was imported before Setuptools" when opening a .ipynb file? with similar error and applied the solution of using pip3 install --upgrade pip setuptools. However, this does not solve my issue. How to resolve this error and what did I do wrong? I still have the problem, any help is appreciated. Thanks in advance.

heyula
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0 Answers0