Trying to determine how to keep the colored legend and remove the greyscale one. problem occured when I added the *labs(colour = "cover type") line.
nmds_plot_new <- ggplot(plot_df, aes(x = NMDS1, y = NMDS2)) +
coord_fixed() +
geom_point(aes(color = covertype, shape = covertype), size = 3, alpha = 0.8) +
stat_ellipse(aes(color = covertype)) +
scale_color_manual(values = pal) +
geom_segment(data = fit_spp, aes(x = 0, xend = NMDS1, y = 0, yend = NMDS2),
arrow = arrow(length = unit(0.25, "cm")),
col = "black") +
geom_text(data = fit_spp, aes(label = species), family="serif") +
labs(title = "NMDS") + labs(colour = "Cover Type") +
theme(text = element_text(family = "serif")) +
clean_background
Tried finding a solution elsewhere but came up short.