You have discovered the reason why the statement "value types are always stored on the stack" is obviously wrong. The truth is that the type of the object being stored is irrelevant to where it is stored. The correct rule is that values with short lifetimes are stored in storage from the short-term "stack" and values with long lifetimes are stored in storage from the long-term "heap".
When you put it that way, it is practically a tautology. Obviously short-lived stuff is allocated from the short-term store, and long-lived stuff is allocated from the long-lived store! How could it be otherwise? But when you put it that way, clearly the type is irrelevant except insofar as the type gives you a hint about the lifetime.
The contents of an array of ints is potentially long-lived, so the ints are allocated from the long-term store. The contents of a local variable of type int is typically short-lived, so it is typically allocated from the short-lived store.