IDs on a page are supposed to be unique, even when you clone them from a template.
If you dynamically create content on your page, then you must change the id of your newly cloned elements to something else. If you want to access all cloned elements, but not the template, you can add a class to them, so you can refer to all elements with that class:
var clonedElement = template.cloneNode(yes); // make a deep copy
clonedElement.setAttribute("id", "somethingElse"); // change the id
clonedElement.setAttribute("class",
clonedElement.getAttribute("class") + " cloned"
);
To access all cloned elements by classname, you can use the getElementsByClassName
method (available in newer browsers) or look at this answer for a more in-depth solution: How to getElementByClass instead of GetElementById with Javascript?
Alternatively, if you have jQuery available, you can do this is far less lines of code:
$("#template").clone().attr("id","somethingElse")
.addClass("cloned").appendTo("#someDiv");
The class lookup is even simpler:
$(".cloned").doSomethingWithTheseElements();
Try to avoid using IDs in the child elements of the cloned structure, as all ids of the cloned element should be changed before adding the clone to the page. Instead, you can refer to the parent element using the new id and traverse the rest of the structure using classnames. Class names do not need to be unique, so you can just leave them as they are.
If you really must use ID's (or unique "name" attributes in form fields), I can strongly suggest using a framework like jQuery or Prototype to handle the DOM traversal; otherwise, it is quite a burden to resolve all the cross-browser issues. Here is an example of some changes deeper in the structure, using jQuery:
$("#template").clone().attr("id","somethingElse")
.addClass("cloned") // add a cloned class to the top element
.find("#foo").attr("id","bar").end() // find and modify a child element
.appendTo("#someDiv"); // finally, add the node to the page