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Questions tagged [tabulizer]

tabulizer: Bindings for 'Tabula' PDF Table Extractor Library

tabulizer provides R bindings to the Tabula java library, which can be used to computationally extract tables from PDF documents.

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76 questions
9
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3 answers

Trouble installing tabulizer package

I used the following code to install the tabulizer package: ghit::install_github(c("ropenscilabs/tabulizerjars", "ropenscilabs/tabulizer"), INSTALL_opts = "--no-multiarch") I get the following error when I run it: ropenscilabs/tabulizerjars …
Bomeru
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3 answers

Split PDF according to pages in R

I have a pdf file with multiple pages, but I am interested in only a subgroup of them. For example, my original PDF has 30 pages and I want only the pages 10 to 16. I tried using the function split_pdf from tabulizer package, that only splits the…
Giovana Stein
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2 answers

Tabulizer package in R: how to scrape tables after specific Title

How to scrape tables preceded with some title text from PDF? I am experimenting with tabulizer package. Here an example of getting a table from a specific page (Polish "Map of Public Health…
Jacek Kotowski
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1 answer

How to resolve Java error when extracting tables from pdf using Tabulizer in R

I'm trying to extract tables from a pdf using the tabulizer package in R. I run the following line: table <- extract_tables('https://fm.dk/media/17137/oekonomisk-redegoerelse-august-2019_weba.pdf', pages = 20) However I keep getting this…
Bjørn Hørsted Bremholm Hansen
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4 answers

Having Issues installing tabulizer package in R

I had a script working with tabulizer, but had to clean my hard drive and reinstall R, and now I cant seem to even download and access the tabulizer library. I am now using R version 4.1.2 64 bit, and am thinking maybe I need to use an earlier…
dunbar111
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Error in installing Tabulizer

Using the instructions described in github and installing Java accordingly with Chocolatey -- plus installing rJava and setting the path in R with Sys.setenv(JAVA_HOME = "C:/Program Files/Java/jdk1.8.0_131")-- I've done the following in…
John Doe
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Trying to resolve Java issue when running Tabulizer in R

I am trying to extract tables from pdfs in R using tabulizer, and keep getting this error when I use extract_tables. Error in .jcall("RJavaTools", "Ljava/lang/Object;", "invokeMethod", cl, : java.lang.IllegalAccessException: class RJavaTools cannot…
lwilliams
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extract_table function causes R to Crash

I am simply using: extract_tables('/Users/ben/OneDrive/Utah Local Governments Trust/Underwriting - Documents/Data Analysis/Emod Calculation/Expected Loss Rates, D-Ratio, Etc.pdf') after loading: library(tabulizer) library(tabulizerjars) It says it…
PotterFan
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"Java exception occurred during rJava bootstrap" when trying to use tabulizer

I'm running Mac OS 10.13.6, and using RStudio 1.1.8, R 3.5.3, Java 11. In case hardware might matter, I'm using a 2013 MacBook Air. I'm trying to run the extract_table function from the r tabulizer package on the Correlates of War World Religion…
user7201984
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Reading tables from PDF in R

I have a PDF with many tables in it, and I'm trying to parse them into a more readable format using R. So far, I've tried two methods: using pdftools::pdftext() to get the text, then basically using regexes to manually read in the tables (honestly…
AWhite
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How can I extract a pdf faster with tabulizer in R

I have a table in a pdf file with more than 100000 rows and over 1900 pages which I decided to write into a .csv file with the R package tabulizer. When I try to exctract the whole data from the pdf file with pdf <- extract_tables("pdffile.pdf",…
csmontt
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2 answers

RStudio fatal error when loading tabulizer

I recently updated R to version 4.2.0 on my Windows 10 PC. When I try to load the package tabulizer, RStudio crashes and the bomb icon with the correspondent "R encountered a fatal error" appears. I reinstalled rJava, tabulizer and tabulizerjar…
JMToral
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1 answer

Deploy shiny app that can call runApp() inside application itself (specifically for tabulizer package)

I'm trying to deploy a Shiny app that allows the user to upload a pdf document and extract a table from a selected page. For this I'm using the package tabulizer. A basic reproducible example: library(shiny) library(tabulizer) ui <- fluidPage( …
Chris Oosthuizen
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1 answer

Extract Text from a pdf only English text Canadian Legislation R

I'm trying to extract data from a Canadian Act for a project (in this case, the Food and Drugs Act), and import it into R. I want to break it up into 2 parts. 1st the table of contents (pic 1). Second, the information in the act (pic 2). But I do…
Alex Betsos
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How to read text like notepad?

I have a PDF files and It have tables like this ( just metaphor) American | Asian | African | European | Middle Animals | | Animals | pottery | East | tree | Flying | fragile | 2010 2 6 19 …
user13232877
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