I have a fairly big application which went over a major overhaul.
The newer version uses lot of JSONP calls and I notice 500 server errors. Nothing is logged in the logs section to determine the error cause. It happens on JS, png and even jersey (servlets) too.
Searching SO and groups suggested that these errors are common during deployment. But it happens even after hours after deployment.
BTW, the application has become slightly bigger and it even causes deadline exception while starting few instances in few rare cases. Sometimes, it starts & serves within 6-10secs. Sometimes it goes to more than 75secs thereby causing a timeout for the similar request. I see the same behavior for warmup requests too. Nothing custom is loaded during app warmup.