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Questions tagged [beaker-notebook]

Beaker notebooks are documents which contain code blocks, output, figures, and text.

Beaker is an open source, notebook-style development environment supporting multiple languages in a single notebook.

Current supported languages include:

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26 questions
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Beaker fails to find Python and Julia installations despite following installation instructions

I have recently installed Beaker Notebook but cannot get it to start Python. I have an existing installation of Python, which I installed using Anaconda (which is actually recommended for Beaker). I have edited beaker.pref.json to point to my…
Constantin
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Jupyter as Zeppelin replacement: multi-lingual Spark

My team is trying to transition from Zeppelin to Jupyter for an application we've built, because Jupyter seems to have more momentum, more opportunities for customization, and be generally more flexible. However, there are a couple of things…
Ken Williams
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In Jupyter Notebooks, the tooltip feature (shift + tab) works for some kernels (e.g. Python 3) but not others (e.g. Scala, Groovy). Is that expected?

This is my first foray into Jupyter Notebooks. My background is in Java and Scala development in classical IDEs (e.g. IntelliJ, Eclipse). I have Jupyter Notebook 5.0.0 installed with only two nbextensions: jupyter-js-widgets and beakerx. My Python…
ArnoldLipton
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Export beaker notebook to pdf

I want to share my notebook offline. I'm looking for something like jupyter-nbconvert for beaker. How can I export my beaker notebook to pdf or other format for offline access?
kolchanov
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1 answer

Adding non standard Python library to Beaker Lab notebook

I would like to use fiona (and a few other third party libraries from Github) in my Beaker Lab notebook and it's not included in the default installation. Is there a way to install new Python packages?
Dasha Merkusheva
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2 answers

R-scatterplot3d rendering in Beaker Notebook

I'm trying to get the scatterplot3d package of R to render within a Beaker Notebook, but cannot get it to work. I can run the code without error, but the graphic is not displayed. Setting the scatterplot3d output to a variable and printing the…
ponderinghydrogen
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2 answers

How to serve Beaker Notebook from different directory

Trying to experiment with Beaker Notebooks, but I can not figure out how to launch from a specified directory. I've downloaded the .zip file (I'm on Windows 10), and can launch from that directory using the beaker.command batch file, but cannot…
ponderinghydrogen
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Beakerx - 'validating problems found: beakerx/tree beakerx/extension'

Trying to get beakerx working with JupyterLab using pipenv. Install $ pipenv install beakerx $ beakerx install Installing /Users/layne/.pyenv/versions/3.7.3/envs/biodb-py3.7.3/lib/python3.7/site-packages/beakerx/static -> beakerx - Validating:…
Kermit
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Connecting to a SQL server in Beaker Notebook?

In iPython I am using the following code to connect to a SQL server with SQLAlchemy: import sqlalchemy as sa import urllib import pandas as pd connection_string = "DRIVER={SQL…
user1566200
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Can I change the heap size for Groovy in Beaker notebook?

When I am launching Beaker notebook, can I change the heap size for Groovy? I'd like to customize this if possible.
JMeinwald
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Where can I put a static file in Beaker notebook so that my HTML can find it?

Where can I put an image or other static file in Beaker so that my HTML can find it? And will this image work if I share the notebook with someone else?
JMeinwald
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Beaker Notebook start Anaconda Python on Windows

How should I configure Beaker to use my pre-installed Anaconda Python3? I followed the instructions here, and then here, but with no success. My beaker.pref.json file looks like: { "autocomplete-parameters" : "true", "pref-format" : "1", …
ragesz
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Can't use R language with Beaker Notebook "Error: R language backend failed!"

I can't figure out how to configure my setting to get R to work in Beaker? I tried both with the experimental beaker-notebook-1.5.3-0-gb1553d1-electron-mac.dmg version because I really don't want to use the browser for my programming. I also tried…
O.rka
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How do I save a Beaker notebook as straight python/r/...?

I just discovered Beaker Notebook. I love the concept, and am desperately keen to use it for work. To do so, I need to be sure I can share my code in other formats. Question Say I write pure Python in a Beaker notebook: Can I save it as a .py file…
user3279453
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Using a Beakerx Custom Magic

I've created a custom Magic command with the intention of generating a spark query programatically. Here's the relevant part of my class that implements the MagicCommandFunctionality: MagicCommandOutcomeItem execute(MagicCommandExecutionParam…
johnxfly
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