An R kernel for Jupyter
Questions tagged [jupyter-irkernel]
163 questions
53
votes
24 answers
jupyter-client has to be installed but “jupyter kernelspec --version” exited with code 127
I have already installed Jupyter notebook in my ubuntu 16.04 machine. In jupyter notebook there is by default python installed. Now I want to use R from jupyter notebook.
To do so I followed IRkernel installation link and run below…

Md Sirajus Salayhin
- 4,974
- 5
- 37
- 46
20
votes
2 answers
Using ipython magics in R jupyter notebook?
I installed jupyter with conda install jupyter and am running a notebook with the r kernal installed from conda create -n my-r-env -c r r-essentials
I am running a notebook and want to run a bash command from a shell.
!echo "hi"
Error in parse(text…

elsherbini
- 1,596
- 13
- 23
15
votes
3 answers
Unable to load IRKernel in Jupyter notebook
I'm pretty new to the forum, so I'm sorry if this question has already been answered. I looked around, and although I saw that some had similar issues, I couldn't find the solution to my problem on any previous posts. So - here goes...
I'm running…

A. Vislova
- 343
- 2
- 3
- 10
14
votes
4 answers
How to solve the ModuleNotFoundError: No module named 'prompt_toolkit.formatted_text' in Jupyter Notebook inside the Pycharm IDE?
I am using Pycharm 2018.2 version in ubuntu 18.04 and I am trying to use the JupyterNoteBook inside the pycharm it's been loading and creating a new notebook. But the cell in the Jupyter always shows busy and it throws some error like…

Bhavani K
- 163
- 1
- 1
- 13
14
votes
2 answers
Haskell under Jupyter
The Internet is strangely absent of instructions on how to get Haskell running under the Jupyter environment. Any documentation that leads you toward this requires you to compile from source, however when attempting to do so, all sorts of build…

Daisha Lynn
- 459
- 1
- 4
- 16
12
votes
3 answers
Display Images from file in R Jupyter notebook
I have an image on disk and want to display it in a markdown cell in an R Jupyter Notebook. How can I go about this?
I know with Python this as simple as importing the Image class from display.

user3617525
- 123
- 1
- 4
11
votes
2 answers
jupyter notebook and github.
I have made a jupyter notebook and want to commit and push on github. I have windows operating system and never worked on github. Can anyone please help me out about how can I do it from scratch?

Nizam
- 147
- 1
- 1
- 8
10
votes
1 answer
How to see all rows of a data frame in a Jupyter notebook with an R kernel?
When I put a data frame into a cell, it shows only some of the rows, with a "..." in the middle.
Edit: I'm looking for R equivalents of these Python notebook calls:
import pandas
# "If max_cols is exceeded, switch to truncate…

dfrankow
- 20,191
- 41
- 152
- 214
7
votes
0 answers
Increase size of rleaflet map in Jupyter Lab display (R in Jupyter)
When using R and rleaflet in a Jupyter Lab Notebook. My output map is short and wide with a vertical scroll box, and I can find no means of increasing it's height.
# Code to reproduce
library(leaflet)
m = leaflet() %>% addTiles()
m
results in:

Colin Talbert
- 454
- 6
- 20
7
votes
2 answers
Map keyboard shortcut to code snippet in Jupyter Lab
Does anyone know if there a way to bind a code snippet to a keyboard shortcut in Jupyter Lab? For example in R Studio you can use Ctrl+Shift+M to write the pipe operator (%>%) quickly and I got used to that functionality so I would like to replicate…

Sraffa
- 1,658
- 12
- 27
6
votes
1 answer
How to restart the server in jupyter hub through command line?
I have an instance of Jupyter running in Jupyter hub where there was an option to start/restart server as shown below:
I then changed the theme using the command
jt -t
Now, I can't see the option to stop and restart my server in my…

P H
- 294
- 1
- 3
- 16
6
votes
2 answers
Can Jupyter run a separate R notebook from within a Python notebook?
I have a Jupyter notebook (python3) which is a batch job -- it runs three separate python3 notebooks using %run. I want to invoke a fourth Jupyter R-kernel notebook from my batch.
Is there a way to execute an external R notebook from a Python…

JeremyDouglass
- 1,361
- 2
- 18
- 31
6
votes
3 answers
Hiding code in jupiter in R
I would like to try to produce reports (pdf and probably html) in jupyter using R kernel. However, I would like to hide code in two ways, depending on audience:
all code cells
some code cells
When I have looked for this I found answers for python…

Bartek
- 173
- 1
- 9
5
votes
2 answers
r graphs in jupyter - unable to start png() device
I am using R in Jupyter, but unable to plot graphs in the notebook itself.
Here is a reproducible example
set.seed(123)
mat = as.matrix(x = rnorm(100), y = rnorm(100))
plot(mat)
In Jupyter:
Error in png(tf, width, height, "in", pointsize, bg,…

Gaurav Singhal
- 998
- 2
- 10
- 25
5
votes
1 answer
Using Vi Keys in a Jupyter Console
I would like to know how to use vi-like key bindings in a Jupyter console -- not just with ipython, but with any kernel.
Previous answers show this is possible for ipython. So, perhaps there is some flag or config file where this can be specified.…

Joe Shields
- 113
- 6